RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CEP63Q96MT8 703 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.06
HMGCL-203ENST00000374490 ST7Q9NRC1 585 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 PLAGL2Q9UPG8 496 aa15.46■□□□□ 0.06
HMGCL-203ENST00000374490 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
HMGCL-203ENST00000374490 TARSL2A2RTX5 802 aaKnown RBP15.45■□□□□ 0.06
HMGCL-203ENST00000374490 LCA5LO95447 670 aa15.45■□□□□ 0.06
HMGCL-203ENST00000374490 MAP1SQ66K74 1059 aaPredicted RBP15.45■□□□□ 0.06
HMGCL-203ENST00000374490 APOBEC3HQ6NTF7 200 aaKnown RBP15.45■□□□□ 0.06
HMGCL-203ENST00000374490 NIM1KQ8IY84 436 aa15.45■□□□□ 0.06
HMGCL-203ENST00000374490 SECISBP2LQ93073 1101 aaKnown RBP15.45■□□□□ 0.06
HMGCL-203ENST00000374490 DHX36Q9H2U1 1008 aaKnown RBP15.45■□□□□ 0.06
HMGCL-203ENST00000374490 PSTPIP2Q9H939 334 aa15.45■□□□□ 0.06
HMGCL-203ENST00000374490 SERPINA10Q9UK55 444 aa15.45■□□□□ 0.06
HMGCL-203ENST00000374490 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
HMGCL-203ENST00000374490 GREB1LQ9C091 1923 aaPredicted RBP15.44■□□□□ 0.06
HMGCL-203ENST00000374490 POTEMA6NI47 508 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 YDJCA8MPS7 323 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 EDIL3O43854 480 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 TACC1O75410 805 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 IDEP14735 1019 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 VEGFBP49765 207 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 USP11P51784 963 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 USP14P54578 494 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 AP3B2Q13367 1082 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 LRRC55Q6ZSA7 311 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 DYMQ7RTS9 669 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 CCDC65Q8IXS2 484 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 RUBCNQ92622 972 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 PNKPQ96T60 521 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 NYAP2Q9P242 653 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 L1RE1Q9UN81 338 aa15.44■□□□□ 0.06
HMGCL-203ENST00000374490 RHOXF2BP0C7M4 288 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 CTCFP49711 727 aaPredicted RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 KLK7P49862 253 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 COASYQ13057 564 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 UBE2SQ16763 222 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 CCDC70Q6NSX1 233 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 NEK11Q8NG66 645 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 MKL1Q969V6 931 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 RHOXF2Q9BQY4 288 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 PSD3Q9NYI0 1048 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 PCDHA12Q9UN75 941 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 CYP3A7-CYP3A51PA0A087WV96 503 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 SSU72P8A0A1W2PR75 194 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 POLR3GO15318 223 aaPredicted RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 PPP1R11O60927 126 aaPredicted RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 ATP1A1P05023 1023 aaKnown RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 PRLRP16471 622 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 CYP3A7P24462 503 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 FAM26FQ5R3K3 315 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 PDXDC1Q6P996 788 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 SLFN12Q8IYM2 578 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 CCDC155Q8N6L0 562 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 SYN2Q92777 582 aaPredicted RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 HAS1Q92839 578 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 MBOAT7Q96N66 472 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 ALS2CR12Q96Q35 445 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 DEF6Q9H4E7 631 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 VIPAS39Q9H9C1 493 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 ABCB6Q9NP58 842 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 PANK4Q9NVE7 773 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.43■□□□□ 0.06
HMGCL-203ENST00000374490 HDAC9Q9UKV0 1011 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 JRKLQ9Y4A0 524 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 COL4A3BPQ9Y5P4 624 aa15.43■□□□□ 0.06
HMGCL-203ENST00000374490 USP17L10C9JJH3 530 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 MPHOSPH10O00566 681 aaKnown RBP15.42■□□□□ 0.06
HMGCL-203ENST00000374490 VSNL1P62760 191 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 ITIH3Q06033 890 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 MAPK8IP2Q13387 824 aaPredicted RBP15.42■□□□□ 0.06
HMGCL-203ENST00000374490 DEFB115Q30KQ5 88 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 ZCWPW2Q504Y3 356 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 HAUS3Q68CZ6 603 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 NCAPH2Q6IBW4 605 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 TEX2Q8IWB9 1127 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 CAGE1Q8TC20 777 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 HPS3Q969F9 1004 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 EXOC4Q96A65 974 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 DNAJC19Q96DA6 116 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 IFIH1Q9BYX4 1025 aaKnown RBP15.42■□□□□ 0.06
HMGCL-203ENST00000374490 SH2D4AQ9H788 454 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 MMRN2Q9H8L6 949 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 KANSL2Q9H9L4 492 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 LUC7LQ9NQ29 371 aaKnown RBP15.42■□□□□ 0.06
HMGCL-203ENST00000374490 ABT1Q9ULW3 272 aaKnown RBP15.42■□□□□ 0.06
HMGCL-203ENST00000374490 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
HMGCL-203ENST00000374490 SCN4AP35499 1836 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 PCNTO95613 3336 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 TBX3O15119 743 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 RAD17O75943 681 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 KIF11P52732 1056 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 MARSP56192 900 aaKnown RBP15.41■□□□□ 0.06
HMGCL-203ENST00000374490 CCDC40Q4G0X9 1142 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms