RNA–Protein interactions for RNA: ENST00000374461.1

SVEP1-201, Transcript of sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SVEP1, Length 3,257 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1-201ENST00000374461 MAP1SQ66K74 1059 aaPredicted RBP13.39□□□□□ -0.27
SVEP1-201ENST00000374461 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 POTEEQ6S8J3 1075 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 GSDMAQ96QA5 445 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 ZNF536O15090 1300 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 GCFC2P16383 781 aaKnown RBP13.39□□□□□ -0.27
SVEP1-201ENST00000374461 PDE4DQ08499 809 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 GRB10Q13322 594 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 SV2BQ7L1I2 683 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 DACH1Q9UI36 760 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 GUCA1BQ9UMX6 200 aa13.39□□□□□ -0.27
SVEP1-201ENST00000374461 POLR2AP24928 1970 aaKnown RBP13.39□□□□□ -0.27
SVEP1-201ENST00000374461 MSH4O15457 936 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 ABL1P00519 1130 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
SVEP1-201ENST00000374461 SREBF1P36956 1147 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
SVEP1-201ENST00000374461 RPS6P62753 249 aaKnown RBP13.38□□□□□ -0.27
SVEP1-201ENST00000374461 SP4Q02446 784 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 PPP2R3AQ06190 1150 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 WDR78Q5VTH9 848 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
SVEP1-201ENST00000374461 PYM1Q9BRP8 204 aaKnown RBP13.38□□□□□ -0.27
SVEP1-201ENST00000374461 PAGR1Q9BTK6 254 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 SLC39A2Q9NP94 309 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 RGL1Q9NZL6 768 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 COL20A1Q9P218 1284 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 PSME4Q14997 1843 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 TRIM49BA6NDI0 452 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 VWA5AO00534 786 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 IRF6O14896 467 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 FCER1AP12319 257 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
SVEP1-201ENST00000374461 SLC38A10Q9HBR0 1119 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 SAMM50Q9Y512 469 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 CDC25BP30305 580 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 NF2P35240 595 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 TREML2Q5T2D2 321 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 IL31RAQ8NI17 732 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 EXOC1Q9NV70 894 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
SVEP1-201ENST00000374461 NPHP3-ACAD11A0A0J9YXS1 232 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TRAF5O00463 557 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TRAF1Q13077 416 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 ZSCAN12O43309 604 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 CASP14P31944 242 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 PRCPP42785 496 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 RBL2Q08999 1139 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TERF2Q15554 542 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 LRCH2Q5VUJ6 765 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TPH2Q8IWU9 490 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 MED15Q96RN5 788 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 WDR18Q9BV38 432 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 MRPL44Q9H9J2 332 aaKnown RBP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 FANCGO15287 622 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 GAS7O60861 476 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 ARP10275 920 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 BAATQ14032 418 aaPredicted RBP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
SVEP1-201ENST00000374461 LRRC41Q15345 812 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 CDCA5Q96FF9 252 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TAAR1Q96RJ0 339 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 TRIM10Q9UDY6 481 aa13.37□□□□□ -0.27
SVEP1-201ENST00000374461 MYMKA6NI61 221 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 MED24O75448 989 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 OAS2P29728 719 aaKnown RBP13.36□□□□□ -0.27
SVEP1-201ENST00000374461 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
SVEP1-201ENST00000374461 PSMC6P62333 389 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 STK4Q13043 487 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 COG2Q14746 738 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 SPATA20Q8TB22 786 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 NELFBQ8WX92 580 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 LENG9Q96B70 501 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 RMDN3Q96TC7 470 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 WDR11Q9BZH6 1224 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 HSD3B7Q9H2F3 369 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 BLOC1S4Q9NUP1 217 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 INTS13Q9NVM9 706 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 KBTBD4Q9NVX7 518 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 ZNF112Q9UJU3 913 aa13.36□□□□□ -0.27
SVEP1-201ENST00000374461 SNCAIPQ9Y6H5 919 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms