RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 HERC4Q5GLZ8 1057 aaPredicted RBP17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 SLC30A10Q6XR72 485 aa17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 CCDC84Q86UT8 332 aaPredicted RBP17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 DNAAF5Q86Y56 855 aa17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 EXOC4Q96A65 974 aa17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 LSM14BQ9BX40 385 aaKnown RBP17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 DMGDHQ9UI17 866 aaKnown RBP17.23■□□□□ 0.35
TMEM50A-201ENST00000374358 SMCHD1A6NHR9 2005 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 USO1O60763 962 aaKnown RBP17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 TACC1O75410 805 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 PSMC6P62333 389 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 TRIM58Q8NG06 486 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 LRRC1Q9BTT6 524 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 JRKLQ9Y4A0 524 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 GDF11O95390 407 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 FKBP3Q00688 224 aaKnown RBP17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 CDC37Q16543 378 aaPredicted RBP17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 ZSCAN26Q16670 478 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 GPATCH4Q5T3I0 446 aaKnown RBP17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 SCFD1Q8WVM8 642 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 MS4A14Q96JA4 679 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 OSBPL9Q96SU4 736 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 TSGA10Q9BZW7 698 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 CALCOCO1Q9P1Z2 691 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 SWAP70Q9UH65 585 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 HPCAL4Q9UM19 191 aa17.22■□□□□ 0.35
TMEM50A-201ENST00000374358 AFF2P51816 1311 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 SYF2O95926 243 aaKnown RBP17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 CYP11B2P19099 503 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 NAP1L1P55209 391 aaKnown RBP17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 KCTD19Q17RG1 926 aaPredicted RBP17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 PRR16Q569H4 304 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 HSP90B2PQ58FF3 399 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 TEKT1Q969V4 418 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 SELENOOQ9BVL4 669 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 ANO3Q9BYT9 981 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 FAM204AQ9H8W3 233 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 PCDHA2Q9Y5H9 948 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 G3V3G9 751 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 HLA-DOAP06340 250 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 CAPN2P17655 700 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 SEPT2Q15019 361 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 ASTE1Q2TB18 679 aaPredicted RBP17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 ARSHQ5FYA8 562 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 FAM83BQ5T0W9 1011 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 DCAF8Q5TAQ9 597 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
TMEM50A-201ENST00000374358 RNF40O75150 1001 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 FGFR1OPO95684 399 aaKnown RBP17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 CRKP46108 304 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 RBM5P52756 815 aaKnown RBP eCLIP17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 PACSIN2Q9UNF0 486 aaPredicted RBP17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 MEIS2O14770 477 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 LCA5LO95447 670 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 KRT18P05783 430 aaKnown RBP17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 PSMD2Q13200 908 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 PABPC4Q13310 644 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■□□□ 11.4
TMEM50A-201ENST00000374358 FOXR1Q6PIV2 292 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 SPATA4Q8NEY3 305 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 PACSIN1Q9BY11 444 aa17.2■□□□□ 0.34
TMEM50A-201ENST00000374358 FAM170AA1A519 330 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 ACTN1P12814 892 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 CYP4A11Q02928 519 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 RAPGEF1Q13905 1077 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 SLFN13Q68D06 897 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 SH3BP5LQ7L8J4 393 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 CYP2W1Q8TAV3 490 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 TLR10Q9BXR5 811 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 KCNMB3Q9NPA1 279 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 GREB1LQ9C091 1923 aaPredicted RBP17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 SIPA1L1O43166 1804 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 GGCXP38435 758 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 PTPROQ16827 1216 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 CCNI2Q6ZMN8 369 aaPredicted RBP17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 SIAH1Q8IUQ4 282 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 PROM2Q8N271 834 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 FAM133AQ8N9E0 248 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 FAM71BQ8TC56 605 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 IKZF4Q9H2S9 585 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 KCTD10Q9H3F6 313 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 BMP2KQ9NSY1 1161 aaPredicted RBP17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 EMILIN3Q9NT22 766 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 ABCB11O95342 1321 aa17.19■□□□□ 0.34
TMEM50A-201ENST00000374358 FTCDO95954 541 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 JAG1P78504 1218 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 TAF3Q5VWG9 929 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 CATSPER3Q86XQ3 398 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 TARSL2A2RTX5 802 aaKnown RBP17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 RSPH10B2B2RC85 870 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms