RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TLCD1Q96CP7 247 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 IQCDQ96DY2 449 aa14.16□□□□□ -0.14
PRPF4-201ENST00000374198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■□ 19.7
PRPF4-201ENST00000374198 NHSQ6T4R5 1651 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 PSMA7O14818 248 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 ZAP70P43403 619 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 RNASE9P60153 205 aaKnown RBP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 SF3A3Q12874 501 aaKnown RBP eCLIP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 SCARF1Q14162 830 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 CSGALNACT2Q8N6G5 542 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 USP38Q8NB14 1042 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 B4GALNT2Q8NHY0 566 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 EPAS1Q99814 870 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 SAMD15Q9P1V8 674 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 MYH13Q9UKX3 1938 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 LRRD1A4D1F6 860 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 EIF4E1BA6NMX2 242 aaKnown RBP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 IGF2BP3O00425 579 aaKnown RBP eCLIP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 SART1O43290 800 aaKnown RBP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 ATP2C1P98194 919 aaPredicted RBP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 PTGDRQ13258 359 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 CCDC38Q502W7 563 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 MIIPQ5JXC2 388 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 APLFQ8IW19 511 aaPredicted RBP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 DUSP9Q99956 384 aaKnown RBP14.15□□□□□ -0.14
PRPF4-201ENST00000374198 NEUROG2Q9H2A3 272 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 ABCF3Q9NUQ8 709 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 ANKIB1Q9P2G1 1089 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 TMEM59LQ9UK28 342 aa14.15□□□□□ -0.14
PRPF4-201ENST00000374198 A8MUI8 341 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 UBOX5O94941 541 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 MMEP08473 750 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 KRT2P35908 639 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 MXRA7P84157 204 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 AMOTQ4VCS5 1084 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRPF4-201ENST00000374198 ZSCAN29Q8IWY8 852 aaPredicted RBP14.14□□□□□ -0.15
PRPF4-201ENST00000374198 LRRC34Q8IZ02 419 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 TEKT4Q8WW24 435 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 SHISA4Q96DD7 197 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 ELAC2Q9BQ52 826 aaKnown RBP14.14□□□□□ -0.15
PRPF4-201ENST00000374198 NOC4LQ9BVI4 516 aaKnown RBP14.14□□□□□ -0.15
PRPF4-201ENST00000374198 ECT2Q9H8V3 914 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 PALMO75781 387 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 RNF8O76064 485 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 NPTXRO95502 500 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 FTCDO95954 541 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 CHN1P15882 459 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 TRIM74Q86UV6 250 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 TRIM73Q86UV7 250 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 DOT1LQ8TEK3 1739 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 EEF2KMTQ96G04 330 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 ZNF594Q96JF6 807 aaPredicted RBP14.14□□□□□ -0.15
PRPF4-201ENST00000374198 CNOT6LQ96LI5 555 aaKnown RBP14.14□□□□□ -0.15
PRPF4-201ENST00000374198 ADAM22Q9P0K1 906 aa14.14□□□□□ -0.15
PRPF4-201ENST00000374198 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 ABLIM1O14639 778 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 KRT16P08779 473 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 ADORA1P30542 326 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 FLT3P36888 993 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 SLC1A4P43007 532 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 MTIF2P46199 727 aaKnown RBP14.13□□□□□ -0.15
PRPF4-201ENST00000374198 ZNF131P52739 623 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 PDIA5Q14554 519 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 TTC38Q5R3I4 469 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 ANO7Q6IWH7 933 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 SPATA21Q7Z572 469 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 CWC25Q9NXE8 425 aaPredicted RBP14.13□□□□□ -0.15
PRPF4-201ENST00000374198 LMCD1Q9NZU5 365 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 PNMA2Q9UL42 364 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 GPR75-ASB3A0A0A6YYF3 556 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 BHMG1C9JSJ3 638 aaPredicted RBP14.13□□□□□ -0.15
PRPF4-201ENST00000374198 COQ9O75208 318 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 PHKG2P15735 406 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 CNGA1P29973 690 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 GFPT1Q06210 699 aaPredicted RBP14.13□□□□□ -0.15
PRPF4-201ENST00000374198 TCIRG1Q13488 830 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 TXNRD1Q16881 649 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 KIAA0753Q2KHM9 967 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 PPP1R15BQ5SWA1 713 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 ATXN2LQ8WWM7 1075 aaKnown RBP14.13□□□□□ -0.15
PRPF4-201ENST00000374198 LRRC4CQ9HCJ2 640 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 CHCHD3Q9NX63 227 aaKnown RBP14.13□□□□□ -0.15
PRPF4-201ENST00000374198 ASB3Q9Y575 518 aa14.13□□□□□ -0.15
PRPF4-201ENST00000374198 SPDYE5A6NIY4 337 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 XBP1P17861 261 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 MSH2P43246 934 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 MRPS35P82673 323 aaKnown RBP14.12□□□□□ -0.15
PRPF4-201ENST00000374198 ATP11AP98196 1134 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 R3HDM1Q15032 1099 aaKnown RBP14.12□□□□□ -0.15
PRPF4-201ENST00000374198 ASTE1Q2TB18 679 aaPredicted RBP14.12□□□□□ -0.15
PRPF4-201ENST00000374198 GALNTL6Q49A17 601 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 MEI1Q5TIA1 1274 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 TRIM68Q6AZZ1 485 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 LRP10Q7Z4F1 713 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 ARHGAP22Q7Z5H3 698 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 FAM114A1Q8IWE2 563 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 KLHL29Q96CT2 875 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms