RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CCDC127Q96BQ5 260 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 NRBF2Q96F24 287 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 ACCSQ96QU6 501 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 MIS12Q9H081 205 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 TCP10L2B9ZVM9 353 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 KAZNQ674X7 775 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 EFHD1Q9BUP0 239 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 ZNF148Q9UQR1 794 aa15.4■□□□□ 0.06
LMX1B-202ENST00000373474 E2F5Q15329 346 aa15.39■□□□□ 0.06
LMX1B-202ENST00000373474 NXNQ6DKJ4 435 aa15.39■□□□□ 0.06
LMX1B-202ENST00000373474 CAPN12Q6ZSI9 719 aa15.39■□□□□ 0.06
LMX1B-202ENST00000373474 SMCR8Q8TEV9 937 aaPredicted RBP15.39■□□□□ 0.06
LMX1B-202ENST00000373474 GLG1Q92896 1179 aa15.39■□□□□ 0.06
LMX1B-202ENST00000373474 PDLIM2Q96JY6 352 aa15.39■□□□□ 0.06
LMX1B-202ENST00000373474 YY1AP1Q9H869 796 aa15.39■□□□□ 0.06
LMX1B-202ENST00000373474 CNOT10Q9H9A5 744 aaKnown RBP15.39■□□□□ 0.06
LMX1B-202ENST00000373474 ABCA6Q8N139 1617 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 WDR17Q8IZU2 1322 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 POLR2BP30876 1174 aaKnown RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 MAP3K7CLP57077 242 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 LRRC63Q05C16 580 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 SCYL2Q6P3W7 929 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 FMR1NBQ8N0W7 255 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 POMGNT1Q8WZA1 660 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 JPH2Q9BR39 696 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 GINS2Q9Y248 185 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 NPHP4O75161 1426 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 RNF17Q9BXT8 1623 aaKnown RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 KCTD1Q719H9 257 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 CCDC124Q96CT7 223 aaKnown RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 ZNF577Q9BSK1 485 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 ANKFY1Q9P2R3 1169 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 IVNS1ABPQ9Y6Y0 642 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 DEUP1Q05D60 604 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 DHX40Q8IX18 779 aaKnown RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 NDST4Q9H3R1 872 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 GUCY2CP25092 1073 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 MCAMP43121 646 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-202ENST00000373474 SLFNL1Q499Z3 407 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 TRIM50Q86XT4 487 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 MLXIPQ9HAP2 919 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 GCNT4Q9P109 453 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 CCPG1Q9ULG6 757 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 NEDD4P46934 1319 aa15.39■□□□□ 0.05
LMX1B-202ENST00000373474 SETBP1Q9Y6X0 1596 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 KIF1CO43896 1103 aaKnown RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 NT5C2P49902 561 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 YARSP54577 528 aaKnown RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 RASGRF1Q13972 1273 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 MMS22LQ6ZRQ5 1243 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 OSBPL5Q9H0X9 879 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 CHD1O14646 1710 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 PPEF1O14829 653 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 ECEL1O95672 775 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 TNFAIP1Q13829 316 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 BSPRYQ5W0U4 402 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 JADE1Q6IE81 842 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 RINT1Q6NUQ1 792 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 STRBPQ96SI9 672 aaKnown RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 SATB2Q9UPW6 733 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 ZDHHC9Q9Y397 364 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 A2ML1A8K2U0 1454 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 PTPREP23469 700 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 CCDC92Q53HC0 331 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 ZNF653Q96CK0 615 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 SAAL1Q96ER3 474 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 FAM81BQ96LP2 452 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 GPHNQ9NQX3 736 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 USP21Q9UK80 565 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 NRKQ7Z2Y5 1582 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 LMNAP02545 664 aaKnown RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 HSPA6P17066 643 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 CDC25AP30304 524 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 MAPK4P31152 587 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 POLGP54098 1239 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 TBC1D10CQ8IV04 446 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 ATP8A1Q9Y2Q0 1164 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 ORC6Q9Y5N6 252 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 MYO1FO00160 1098 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 ECM2O94769 699 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-202ENST00000373474 ICE2Q659A1 982 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 KLHL29Q96CT2 875 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 BRIP1Q9BX63 1249 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 TMEM206Q9H813 350 aa15.38■□□□□ 0.05
LMX1B-202ENST00000373474 POLR1AO95602 1720 aaPredicted RBP15.37■□□□□ 0.05
LMX1B-202ENST00000373474 GFPT2O94808 682 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 EEF1DP29692 281 aaKnown RBP15.37■□□□□ 0.05
LMX1B-202ENST00000373474 GARSP41250 739 aaKnown RBP15.37■□□□□ 0.05
LMX1B-202ENST00000373474 TCP11Q8WWU5 503 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 PCDHB4Q9Y5E5 795 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 MAGEA9P43362 315 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 MECOMQ03112 1051 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 ABHD10Q9NUJ1 306 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 PACSIN2Q9UNF0 486 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms