RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 PPP2R3CQ969Q6 453 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 C16orf70Q9BSU1 422 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 TREHO43280 583 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 NR3C2P08235 984 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 GOLGA8HP0CJ92 632 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 SMIM10L2AP0DMW4 78 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 SMIM10L2BP0DMW5 78 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 CELF3Q5SZQ8 465 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 GPATCH4Q5T3I0 446 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 ASIC4Q96FT7 647 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 PXMP2Q9NR77 195 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 CLEC1BQ9P126 229 aa18.35■□□□□ 0.53
TRAPPC3-203ENST00000373163 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-203ENST00000373163 COASYQ13057 564 aa18.34■□□□□ 0.53
TRAPPC3-203ENST00000373163 CAMK1Q14012 370 aa18.34■□□□□ 0.53
TRAPPC3-203ENST00000373163 VPS53Q5VIR6 699 aa18.34■□□□□ 0.53
TRAPPC3-203ENST00000373163 PLVAPQ9BX97 442 aa18.34■□□□□ 0.53
TRAPPC3-203ENST00000373163 UBA5Q9GZZ9 404 aa18.34■□□□□ 0.53
TRAPPC3-203ENST00000373163 RC3H2Q9HBD1 1191 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-203ENST00000373163 RALGAPA2Q2PPJ7 1873 aa18.33■□□□□ 0.53
TRAPPC3-203ENST00000373163 CFAP54Q96N23 3096 aa18.33■□□□□ 0.53
TRAPPC3-203ENST00000373163 PROB1E7EW31 1015 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 H0Y858 1186 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 H3BRB1 525 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 GGPS1O95749 300 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 BTG3Q14201 252 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 KCNV1Q6PIU1 500 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 ASCL5Q7RTU5 278 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 EFHBQ8N7U6 833 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 TTC14Q96N46 770 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 RNPEPQ9H4A4 650 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 TLR9Q9NR96 1032 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 PLAGL2Q9UPG8 496 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 USP15Q9Y4E8 981 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 C5orf42Q9H799 3197 aa18.33■□□□□ 0.52
TRAPPC3-203ENST00000373163 RGS20O76081 388 aa18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 HSPD1P10809 573 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 ERMP1Q7Z2K6 904 aa18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 ADGRD2Q7Z7M1 963 aa18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 RPGRIP1Q96KN7 1286 aa18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 PHF7Q9BWX1 381 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 MRPL11Q9Y3B7 192 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 NLRC5Q86WI3 1866 aa18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 KMT2EQ8IZD2 1858 aa18.32■□□□□ 0.52
TRAPPC3-203ENST00000373163 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 MYCLP12524 364 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 ICAM3P32942 547 aa18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 NUBP1P53384 320 aa18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 FAM26DQ5JW98 314 aa18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 P2RX5Q93086 422 aa18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 ZNF689Q96CS4 500 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 MLXIPQ9HAP2 919 aa18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 BARX2Q9UMQ3 279 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC3-203ENST00000373163 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 KDM4AO75164 1064 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 CFBP00751 764 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 LGALS2P05162 132 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 GNAT1P11488 350 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 DNAJB1P25685 340 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 NRIP1P48552 1158 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 SP2Q02086 613 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 ADGRF4Q8IZF3 695 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 PI4K2BQ8TCG2 481 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 PDCD2LQ9BRP1 358 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 SETD4Q9NVD3 440 aa18.3■□□□□ 0.52
TRAPPC3-203ENST00000373163 ATG2AQ2TAZ0 1938 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 PRR23AA6NEV1 266 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 GLP2RO95838 553 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 ITGB1P05556 798 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 GHRP10912 638 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 ALX1Q15699 326 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 PTPN21Q16825 1174 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 RBM23Q86U06 439 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 TRIOO75962 3097 aa18.29■□□□□ 0.52
TRAPPC3-203ENST00000373163 ENPP3O14638 875 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 GALR2O43603 387 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 DGKIO75912 1065 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 TGFB3P10600 412 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 HSD17B4P51659 736 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 NAALADL2Q58DX5 795 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 MIER1Q8N108 512 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 SPPL3Q8TCT6 385 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 TRPC6Q9Y210 931 aa18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 MRPL42Q9Y6G3 142 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-203ENST00000373163 KIAA1217Q5T5P2 1943 aa18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 NOP56O00567 594 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 DHX16O60231 1041 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 PDGFBP01127 241 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 FGAP02671 866 aa18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 CHRNA1P02708 482 aa18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 ATF7P17544 494 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 POF1BQ8WVV4 589 aa18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 GPKOWQ92917 476 aaPredicted RBP eCLIP18.27■□□□□ 0.523e-6■□□□□ 9.4
TRAPPC3-203ENST00000373163 RIPOR3Q96MK2 946 aa18.27■□□□□ 0.52
TRAPPC3-203ENST00000373163 USP26Q9BXU7 913 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms