RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 NFKBIAP25963 317 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 SLC12A1Q13621 1099 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 SUPT20HL1Q3ZLR7 823 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 ARMCX2Q7L311 632 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 LMCD1Q9NZU5 365 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 PHLPP2Q6ZVD8 1323 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
VCL-202ENST00000372755 THAP9Q9H5L6 903 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 RWDD2AQ9UIY3 292 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 TFAMQ00059 246 aaKnown RBP12.46□□□□□ -0.41
VCL-202ENST00000372755 OR6B2Q6IFH4 312 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 PRPF38AQ8NAV1 312 aaKnown RBP12.46□□□□□ -0.41
VCL-202ENST00000372755 FBXL13Q8NEE6 735 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 DHX38Q92620 1227 aaKnown RBP12.46□□□□□ -0.41
VCL-202ENST00000372755 SERPINI1Q99574 410 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 SUCLA2Q9P2R7 463 aaPredicted RBP12.46□□□□□ -0.41
VCL-202ENST00000372755 PALD1Q9ULE6 856 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 CARMIL3Q8ND23 1372 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 IFT88Q13099 833 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 ATG16L1Q676U5 607 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 CYP4F22Q6NT55 531 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 PCGF5Q86SE9 256 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 KRT82Q9NSB4 513 aa12.46□□□□□ -0.41
VCL-202ENST00000372755 TOM1L1O75674 476 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 PHKA1P46020 1223 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 ARL13BQ3SXY8 428 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 TTC19Q6DKK2 380 aaPredicted RBP12.46□□□□□ -0.42
VCL-202ENST00000372755 KLC3Q6P597 504 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 TRIM15Q9C019 465 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 LSG1Q9H089 658 aaKnown RBP12.46□□□□□ -0.42
VCL-202ENST00000372755 SLC13A4Q9UKG4 626 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 ENC1O14682 589 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 PSAPP07602 524 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 HP1BP3Q5SSJ5 553 aaPredicted RBP12.46□□□□□ -0.42
VCL-202ENST00000372755 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 ELMSAN1Q6PJG2 1045 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 GIPC2Q8TF65 315 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 DEPDC1BQ8WUY9 529 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 GREM2Q9H772 168 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 GCNT4Q9P109 453 aa12.46□□□□□ -0.42
VCL-202ENST00000372755 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
VCL-202ENST00000372755 UBE2TQ9NPD8 197 aaPredicted RBP12.45□□□□□ -0.42
VCL-202ENST00000372755 SERPING1P05155 500 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 EPHB1P54762 984 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 UBXN2AP68543 259 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 ART3Q13508 389 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 APOA5Q6Q788 366 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 ANGPTL2Q9UKU9 493 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 BMP3P12645 472 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 DYNLT1P63172 113 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
VCL-202ENST00000372755 TBCKQ8TEA7 893 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
VCL-202ENST00000372755 IQANK1A0A1B0GTG1 560 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 SLC4A1P02730 911 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 DHX9Q08211 1270 aaKnown RBP12.45□□□□□ -0.42
VCL-202ENST00000372755 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 NDUFAF2Q8N183 169 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 RNF139Q8WU17 664 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 GCNAQ96QF7 691 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 PCIF1Q9H4Z3 704 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 IRAK4Q9NWZ3 460 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 PRKAG2Q9UGJ0 569 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.45□□□□□ -0.42
VCL-202ENST00000372755 IPO5O00410 1097 aaKnown RBP12.45□□□□□ -0.42
VCL-202ENST00000372755 GFPT2O94808 682 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 SOX5P35711 763 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 LRRC41Q15345 812 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 ZKSCAN8Q15776 578 aaPredicted RBP12.45□□□□□ -0.42
VCL-202ENST00000372755 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 SPICE1Q8N0Z3 855 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 FAM133AQ8N9E0 248 aa12.45□□□□□ -0.42
VCL-202ENST00000372755 DHX36Q9H2U1 1008 aaKnown RBP12.45□□□□□ -0.42
VCL-202ENST00000372755 LRRN2O75325 713 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 EIF3BP55884 814 aaKnown RBP12.44□□□□□ -0.42
VCL-202ENST00000372755 SYDE2Q5VT97 1194 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 NRBF2Q96F24 287 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 STAP2Q9UGK3 403 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 MAP3K7O43318 606 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 STAT2P52630 851 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 C7orf31Q8N865 590 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 GPT2Q8TD30 523 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 CFAP36Q96G28 342 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 PARVGQ9HBI0 331 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 CLIC2O15247 247 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 MXI1P50539 228 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 TRIM67Q6ZTA4 783 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 GDAP1Q8TB36 358 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 NXF1Q9UBU9 619 aaKnown RBP12.44□□□□□ -0.42
VCL-202ENST00000372755 FIS1Q9Y3D6 152 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 BIVM-ERCC5R4GMW8 1640 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms