RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TLR3O15455 904 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 DLATP10515 647 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 KRT15P19012 456 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 Q3C1V9 767 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 BCAS4Q8TDM0 211 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 AK8Q96MA6 479 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 ARMCX3Q9UH62 379 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 AMFRQ9UKV5 643 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 LRRD1A4D1F6 860 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 PSAPP07602 524 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 PKP1Q13835 747 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 LINC00116Q8NCU8 138 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 ST7Q9NRC1 585 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 FAM207AQ9NSI2 230 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 FEM1BQ9UK73 627 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 CYP2E1P05181 493 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 FAM26FQ5R3K3 315 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 RNF207Q6ZRF8 634 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 CRAMP1Q96RY5 1269 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 DIABLOQ9NR28 239 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 TCP1P17987 556 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 STX2P32856 288 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 SNAP25P60880 206 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 CUEDC2Q9H467 287 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 SLC39A2Q9NP94 309 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 MYO1AQ9UBC5 1043 aa14.48□□□□□ -0.09
RAPGEF1-201ENST00000372189 NEXMIFQ5QGS0 1516 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 MYCP01106 439 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 ZSCAN20P17040 1043 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 AFAP1L2Q8N4X5 818 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 HOMER3Q9NSC5 361 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 ANKRD20A3Q5VUR7 823 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 NACC1Q96RE7 527 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 RIPOR2Q9Y4F9 1068 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 NBPF26B4DH59 902 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 GRIN3BO60391 1043 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 SYF2O95926 243 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 GAP43P17677 238 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 FAM83BQ5T0W9 1011 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 NBPF10Q6P3W6 841 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 NBPF15Q8N660 670 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 PI4K2BQ8TCG2 481 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 P3H4Q92791 437 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 CEP170P1Q96L14 293 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 METTL14Q9HCE5 456 aaKnown RBP14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 PDE11AQ9HCR9 933 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 KLHL14Q9P2G3 628 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 STK38LQ9Y2H1 464 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 FRMPD1Q5SYB0 1578 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 ABL1P00519 1130 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 TROVE2P10155 538 aaKnown RBP eCLIP14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 LIG3P49916 1009 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 UBE2SQ16763 222 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 DGKHQ86XP1 1220 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 NLRP7Q8WX94 980 aa14.47□□□□□ -0.09
RAPGEF1-201ENST00000372189 HNRNPDLO14979 420 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 CYP2D6P10635 497 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 ADAM9Q13443 819 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 STAG1Q8WVM7 1258 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 LARP4BQ92615 738 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 PCDHA7Q9UN72 937 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 SNAP23O00161 211 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 MUM1Q2TAK8 710 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 PALM2Q8IXS6 379 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 PRPF38AQ8NAV1 312 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 NUF2Q9BZD4 464 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 NLRC4Q9NPP4 1024 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 KMT5AQ9NQR1 393 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 FBXO40Q9UH90 709 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 INO80B-WBP1J3KQ70 363 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 PIK3CAP42336 1068 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 SRGAP1Q7Z6B7 1085 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 GPIHBP1Q8IV16 184 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 NSUN7Q8NE18 718 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 CCT6BQ92526 530 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 CALR3Q96L12 384 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 INO80BQ9C086 356 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 STAT1P42224 750 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 GABPAQ06546 454 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 HESX1Q9UBX0 185 aa14.46□□□□□ -0.09
RAPGEF1-201ENST00000372189 MMP1P03956 469 aa14.46□□□□□ -0.1
RAPGEF1-201ENST00000372189 EIF2AK2P19525 551 aaKnown RBP14.46□□□□□ -0.1
RAPGEF1-201ENST00000372189 SMIM5Q71RC9 77 aa14.46□□□□□ -0.1
RAPGEF1-201ENST00000372189 SIRT2Q8IXJ6 389 aa14.46□□□□□ -0.1
RAPGEF1-201ENST00000372189 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.46□□□□□ -0.1
RAPGEF1-201ENST00000372189 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 LIFRP42702 1097 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 SNCBQ16143 134 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PHLDB3Q6NSJ2 640 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 ANKRD42Q8N9B4 389 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 MGARPQ8TDB4 240 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 CCDC127Q96BQ5 260 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 BCAP29Q9UHQ4 241 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 ZNRF3Q9ULT6 936 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PTPRUQ92729 1446 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 USP17L10C9JJH3 530 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 CAPN9O14815 690 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 ABCD1P33897 745 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 ATP1A2P50993 1020 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms