RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DIP2CQ9Y2E4 1556 aa12.9□□□□□ -0.35
DEPDC1-201ENST00000370966 NAA35Q5VZE5 725 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 CASC4Q6P4E1 433 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 SHC4Q6S5L8 630 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ANKRD42Q8N9B4 389 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 MASTLQ96GX5 879 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 FAM84BQ96KN1 310 aaPredicted RBP12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 NRXN1Q9ULB1 1477 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 SEC31AO94979 1220 aaKnown RBP12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 UBXN2AP68543 259 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 BFSP1Q12934 665 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 TFDP1Q14186 410 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 CCDC93Q567U6 631 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 BARHL2Q9NY43 387 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ZNF609O15014 1411 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 C1orf167Q5SNV9 1468 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ANO9A1A5B4 782 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 PSMC4P43686 418 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 GRM1Q13255 1194 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 SULF1Q8IWU6 871 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ZNF653Q96CK0 615 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ABHD10Q9NUJ1 306 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ASNSP08243 561 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 PIK3CAP42336 1068 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ZNF131P52739 623 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 EXOC8Q8IYI6 725 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 AFAP1L2Q8N4X5 818 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 CPS1P31327 1500 aa12.89□□□□□ -0.35
DEPDC1-201ENST00000370966 FBXO38Q6PIJ6 1188 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 MAP7D3Q8IWC1 876 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 ADAMTS1Q9UHI8 967 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 PRCPP42785 496 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 GFPT2O94808 682 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 MOCS3O95396 460 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 KRT81Q14533 505 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 SUPT20HL1Q3ZLR7 823 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 EMBQ6PCB8 327 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 SEPT12Q8IYM1 358 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 TBC1D31Q96DN5 1066 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 MRPL47Q9HD33 250 aaKnown RBP12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 AGLP35573 1532 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 LRRN2O75325 713 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 MAPK4P31152 587 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 SMC1BQ8NDV3 1235 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 ANKFY1Q9P2R3 1169 aa12.88□□□□□ -0.35
DEPDC1-201ENST00000370966 EIF3CLB5ME19 914 aaKnown RBP12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 CCDC188H7C350 402 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 KCTD2Q14681 263 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 ALS2CLQ60I27 953 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 PDZD4Q76G19 769 aaPredicted RBP12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 CCDC13Q8IYE1 715 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 MGARPQ8TDB4 240 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 ARHGEF2Q92974 986 aaKnown RBP12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 EIF3CQ99613 913 aaKnown RBP12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 FTCDO95954 541 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 KCNJ6P48051 423 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 CASP8Q14790 479 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 TBC1D9BQ66K14 1250 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 SDCCAG8Q86SQ7 713 aaPredicted RBP12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 HAUS2Q9NVX0 235 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 ODF2LQ9ULJ1 636 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 MMP10P09238 476 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 MIS18BP1Q6P0N0 1132 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 MMS19Q96T76 1030 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 CEP72Q9P209 647 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 PCDHB4Q9Y5E5 795 aa12.87□□□□□ -0.35
DEPDC1-201ENST00000370966 KIF28PB7ZC32 967 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 HGSO14964 777 aaPredicted RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 PNMA6AP0CW24 399 aaPredicted RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 CA8P35219 290 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 GLE1Q53GS7 698 aaKnown RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms