RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CCDC93Q567U6 631 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 RINLQ6ZS11 566 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 BBOF1Q8ND07 529 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 RNF217Q8TC41 542 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 TRIM11Q96F44 468 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 DRC3Q9H069 523 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 LMNB1P20700 586 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 PAX7P23759 505 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 TRIM42Q8IWZ5 723 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 NME8Q8N427 588 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 ARL10Q8N8L6 244 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 MSANTD4Q8NCY6 345 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 MS4A14Q96JA4 679 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 LRRC37BQ96QE4 947 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 SKOR1P84550 965 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 SP4Q02446 784 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 PRR16Q569H4 304 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 RFX8Q6ZV50 586 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 SYT2Q8N9I0 419 aaPredicted RBP13.73□□□□□ -0.21
GPC4-201ENST00000370828 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 ARHGEF10O15013 1369 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
GPC4-201ENST00000370828 LRRN2O75325 713 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 GCP02774 474 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
GPC4-201ENST00000370828 SIRT1Q96EB6 747 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 TTC1Q99614 292 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 PCDHA12Q9UN75 941 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 YWHAGP61981 247 aaKnown RBP eCLIP13.73□□□□□ -0.21
GPC4-201ENST00000370828 ESRRGP62508 458 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 INAQ16352 499 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 PTGISQ16647 500 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 TMEM154Q6P9G4 183 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 C17orf50Q8WW18 174 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 TEKT1Q969V4 418 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 ZSWIM5Q9P217 1185 aa13.73□□□□□ -0.21
GPC4-201ENST00000370828 DAPK3O43293 454 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 FAM107AO95990 144 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 PMS2P54278 862 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 PPP2R5CQ13362 524 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 PPM1KQ8N3J5 372 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 MAML1Q92585 1016 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 ABCC12Q96J65 1359 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 TUBB6Q9BUF5 446 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 RAB20Q9NX57 234 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 A0A1B0GTH6 734 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 SH3BP5O60239 455 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 ATP5HO75947 161 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 KLC1Q07866 573 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 TRIML2Q8N7C3 387 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 METTL14Q9HCE5 456 aaKnown RBP13.72□□□□□ -0.21
GPC4-201ENST00000370828 TMED10P49755 219 aaKnown RBP13.72□□□□□ -0.21
GPC4-201ENST00000370828 BFSP1Q12934 665 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 PROCA1Q8NCQ7 364 aaPredicted RBP13.72□□□□□ -0.21
GPC4-201ENST00000370828 PNMA1Q8ND90 353 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 PFDN4Q9NQP4 134 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 ZFP69BQ9UJL9 534 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 DCTN4Q9UJW0 460 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 SPAG7O75391 227 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 INHBAP08476 426 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 PLCG1P19174 1290 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 TGS1Q96RS0 853 aaKnown RBP13.72□□□□□ -0.21
GPC4-201ENST00000370828 CUEDC2Q9H467 287 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 TFR2Q9UP52 801 aa13.72□□□□□ -0.21
GPC4-201ENST00000370828 BRAFP15056 766 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 SLC8A3P57103 927 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 PRPF31Q8WWY3 499 aaKnown RBP13.71□□□□□ -0.21
GPC4-201ENST00000370828 NLRP3Q96P20 1036 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 MAGEF1Q9HAY2 307 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 PRMT1Q99873 361 aaKnown RBP13.71□□□□□ -0.21
GPC4-201ENST00000370828 DDX39AO00148 427 aaKnown RBP13.71□□□□□ -0.21
GPC4-201ENST00000370828 PDHBP11177 359 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
GPC4-201ENST00000370828 KRT80Q6KB66 452 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 TPH2Q8IWU9 490 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 TRAIPQ9BWF2 469 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.21
GPC4-201ENST00000370828 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 RASA4BC9J798 803 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 RASA4O43374 803 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 DNAJC6O75061 913 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 CDR2Q01850 454 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 OLFML1Q6UWY5 402 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 DTX3LQ8TDB6 740 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 PPWD1Q96BP3 646 aaKnown RBP13.71□□□□□ -0.22
GPC4-201ENST00000370828 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.22
GPC4-201ENST00000370828 AMACRQ9UHK6 382 aa13.71□□□□□ -0.22
GPC4-201ENST00000370828 TCP11X1B4DZS4 312 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
GPC4-201ENST00000370828 SMTNP53814 917 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 SPARCL1Q14515 664 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 NR1I3Q14994 352 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 MAP7D3Q8IWC1 876 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms