RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 CCDC13Q8IYE1 715 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 MS4A14Q96JA4 679 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
PHTF1-202ENST00000369598 CSRNP1Q96S65 589 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 RAD21O60216 631 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 HERVK_113P62684 666 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 CXCL9Q07325 125 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
PHTF1-202ENST00000369598 TTC38Q5R3I4 469 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 NFRKBQ6P4R8 1299 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 AGBL3Q8NEM8 1001 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 PIGSQ96S52 555 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 MLXIPQ9HAP2 919 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
PHTF1-202ENST00000369598 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 GDAQ9Y2T3 454 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 SRPRBQ9Y5M8 271 aaKnown RBP16.78■□□□□ 0.28
PHTF1-202ENST00000369598 KIF13BQ9NQT8 1826 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 STXBP3O00186 592 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 PLEKP08567 350 aaPredicted RBP16.78■□□□□ 0.28
PHTF1-202ENST00000369598 FAM153BP0C7A2 387 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 FNTAP49354 379 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 NAPAP54920 295 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 CCDC96Q2M329 555 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 FAM153CQ494X1 144 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 NAA35Q5VZE5 725 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 GALNT17Q6IS24 598 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 TYW1BQ6NUM6 668 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 ZIM3Q96PE6 472 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 KANSL2Q9H9L4 492 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
PHTF1-202ENST00000369598 FAM153AQ9UHL3 310 aa16.78■□□□□ 0.28
PHTF1-202ENST00000369598 WNT7AO00755 349 aa16.77■□□□□ 0.28
PHTF1-202ENST00000369598 ADAMTS3O15072 1205 aa16.77■□□□□ 0.28
PHTF1-202ENST00000369598 ACTN4O43707 911 aaKnown RBP16.77■□□□□ 0.28
PHTF1-202ENST00000369598 BMP15O95972 392 aa16.77■□□□□ 0.28
PHTF1-202ENST00000369598 ENOX2Q16206 610 aaKnown RBP16.77■□□□□ 0.28
PHTF1-202ENST00000369598 MAATS1Q7Z4T9 603 aa16.77■□□□□ 0.28
PHTF1-202ENST00000369598 OR2W6PQ8NHA6 318 aa16.77■□□□□ 0.28
PHTF1-202ENST00000369598 NAA15Q9BXJ9 866 aaKnown RBP16.77■□□□□ 0.28
PHTF1-202ENST00000369598 VIPAS39Q9H9C1 493 aa16.77■□□□□ 0.28
PHTF1-202ENST00000369598 NFU1Q9UMS0 254 aa16.77■□□□□ 0.28
PHTF1-202ENST00000369598 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.27
PHTF1-202ENST00000369598 SHOX2O60902 331 aaPredicted RBP16.77■□□□□ 0.27
PHTF1-202ENST00000369598 HSF2BPO75031 334 aa16.77■□□□□ 0.27
PHTF1-202ENST00000369598 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.27
PHTF1-202ENST00000369598 CHADLQ6NUI6 762 aa16.77■□□□□ 0.27
PHTF1-202ENST00000369598 RIOX1Q9H6W3 641 aa16.77■□□□□ 0.27
PHTF1-202ENST00000369598 DDX20Q9UHI6 824 aaKnown RBP16.77■□□□□ 0.27
PHTF1-202ENST00000369598 COL4A5P29400 1685 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 CCDC194A0A1B0GVG4 234 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 GBP2P32456 591 aaPredicted RBP16.76■□□□□ 0.27
PHTF1-202ENST00000369598 LSP1P33241 339 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 ABCB5Q2M3G0 1257 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 CCDC181Q5TID7 509 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 RNF217Q8TC41 542 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 SYMPKQ92797 1274 aaKnown RBP16.76■□□□□ 0.27
PHTF1-202ENST00000369598 SLC40A1Q9NP59 571 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 CHUKO15111 745 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 EEF2P13639 858 aaKnown RBP16.76■□□□□ 0.27
PHTF1-202ENST00000369598 COPB1P53618 953 aaKnown RBP16.76■□□□□ 0.27
PHTF1-202ENST00000369598 SATB1Q01826 763 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 ZNF579Q8NAF0 562 aaKnown RBP16.76■□□□□ 0.27
PHTF1-202ENST00000369598 RASGRP4Q8TDF6 673 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 THOC1Q96FV9 657 aaKnown RBP16.76■□□□□ 0.27
PHTF1-202ENST00000369598 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
PHTF1-202ENST00000369598 CD2APQ9Y5K6 639 aa16.76■□□□□ 0.27
PHTF1-202ENST00000369598 FAM237AA0A1B0GTK4 181 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 HGSO14964 777 aaPredicted RBP16.75■□□□□ 0.27
PHTF1-202ENST00000369598 GDF11O95390 407 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 ZNF543Q08ER8 600 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 SEPT2Q15019 361 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 BAIAP2L1Q9UHR4 511 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 ATRNL1Q5VV63 1379 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 SMCO2A6NFE2 343 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 KCNJ18B7U540 433 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 IPO7O95373 1038 aaKnown RBP16.75■□□□□ 0.27
PHTF1-202ENST00000369598 MOCS3O95396 460 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
PHTF1-202ENST00000369598 TMOD1P28289 359 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
PHTF1-202ENST00000369598 PTGDRQ13258 359 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 KCNJ12Q14500 433 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
PHTF1-202ENST00000369598 RBM26Q5T8P6 1007 aaKnown RBP16.75■□□□□ 0.27
PHTF1-202ENST00000369598 TMEM179Q6ZVK1 233 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 PAGE5Q96GU1 130 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 SGSM3Q96HU1 749 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.27
PHTF1-202ENST00000369598 C6orf50Q9HD87 102 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 NYAP2Q9P242 653 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 LRWD1Q9UFC0 647 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 BUB1O43683 1085 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 GNA11P29992 359 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 MCM7P33993 719 aa16.75■□□□□ 0.27
PHTF1-202ENST00000369598 CARSP49589 748 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms