RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 ASIC1P78348 528 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 PPP2R5CQ13362 524 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 CTTNQ14247 550 aaKnown RBP15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 SARM1Q6SZW1 724 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 SV2BQ7L1I2 683 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 GLIS3Q8NEA6 775 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 MAGEF1Q9HAY2 307 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 JADE2Q9NQC1 790 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 CTNND2Q9UQB3 1225 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 MYH11P35749 1972 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 GAS7O60861 476 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 STK4Q13043 487 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 PTPN21Q16825 1174 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 ZNF658Q5TYW1 1059 aaPredicted RBP15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 RIOX2Q8IUF8 465 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 SPC24Q8NBT2 197 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 DNAJC19Q96DA6 116 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 CCDC34Q96HJ3 373 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 HSD17B14Q9BPX1 270 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 SAMSN1Q9NSI8 373 aaKnown RBP15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 PLXNB2O15031 1838 aa15.79■□□□□ 0.12
HMGCS2-201ENST00000369406 PLXNA1Q9UIW2 1896 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 RHOBTB3O94955 611 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 NR3C2P08235 984 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 RPA1P27694 616 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 PMS1P54277 932 aaKnown RBP15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 SETQ01105 290 aaPredicted RBP15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 SNAPC2Q13487 334 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 ARSHQ5FYA8 562 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 VSIG10LQ86VR7 867 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 KIAA0895Q8NCT3 520 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 BRI3BPQ8WY22 251 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 DYDC2Q96IM9 177 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 FGFBP2Q9BYJ0 223 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 SLITRK3O94933 977 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 PLA2G4BP0C869 781 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 BCRP11274 1271 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 SLC12A3P55017 1021 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 KCNB1Q14721 858 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 SAMD3Q8N6K7 520 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 DDX12PQ92771 950 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 NRBP1Q9UHY1 535 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 NFE2L3Q9Y4A8 694 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 KDM3AQ9Y4C1 1321 aa15.78■□□□□ 0.12
HMGCS2-201ENST00000369406 TRIM49BA6NDI0 452 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 SSBP05455 408 aaKnown RBP eCLIP15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 ZNF18P17022 549 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 ERCC3P19447 782 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 PABPC4Q13310 644 aaKnown RBP eCLIP15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 MTMR1Q13613 665 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 NIPA1Q7RTP0 329 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 NCAPG2Q86XI2 1143 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 GIMAP8Q8ND71 665 aaPredicted RBP15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 POLD4Q9HCU8 107 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 LOXHD1Q8IVV2 1947 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
HMGCS2-201ENST00000369406 TESPA1A2RU30 521 aaPredicted RBP15.77■□□□□ 0.11
HMGCS2-201ENST00000369406 EHHADHQ08426 723 aa15.77■□□□□ 0.11
HMGCS2-201ENST00000369406 ENOX1Q8TC92 643 aaKnown RBP15.77■□□□□ 0.11
HMGCS2-201ENST00000369406 FGD4Q96M96 766 aa15.77■□□□□ 0.11
HMGCS2-201ENST00000369406 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.77■□□□□ 0.11
HMGCS2-201ENST00000369406 SOWAHBA6NEL2 793 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 BTBD19C9JJ37 291 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 CCNE2O96020 404 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 MYL1P05976 194 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 CYP11B2P19099 503 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 PDE4DQ08499 809 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 FASTKD5Q7L8L6 764 aaKnown RBP15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 ADSSL1Q8N142 457 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 MB21D1Q8N884 522 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 BANK1Q8NDB2 785 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 CHST13Q8NET6 341 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 ZNF830Q96NB3 372 aaPredicted RBP15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 PTPN18Q99952 460 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 POLR3CQ9BUI4 534 aaPredicted RBP15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 NT5C3AQ9H0P0 336 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 INTS13Q9NVM9 706 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 IFNKQ9P0W0 207 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 RABGAP1Q9Y3P9 1069 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 ARID2Q68CP9 1835 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 DOCK3Q8IZD9 2030 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 SMTNL1A8MU46 457 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 ERCC5P28715 1186 aaPredicted RBP15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 CCDC144BQ3MJ40 725 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 HAUS3Q68CZ6 603 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 GPBP1Q86WP2 473 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 NSUN6Q8TEA1 469 aaKnown RBP15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 NAP1L5Q96NT1 182 aaPredicted RBP15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 RUSC1Q9BVN2 902 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 TEKT3Q9BXF9 490 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 XPO4Q9C0E2 1151 aaKnown RBP15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 CENPFP49454 3210 aa15.76■□□□□ 0.11
HMGCS2-201ENST00000369406 SORBS3O60504 671 aa15.75■□□□□ 0.11
HMGCS2-201ENST00000369406 PGK2P07205 417 aa15.75■□□□□ 0.11
HMGCS2-201ENST00000369406 CCND2P30279 289 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms