RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 MYBP10242 640 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 TM4SF1P30408 202 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 NOVP48745 357 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 POLR2FP61218 127 aaKnown RBP13.85□□□□□ -0.19
LINC01561-201ENST00000369071 COASYQ13057 564 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 SLC18A3Q16572 532 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 ECM1Q16610 540 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 KRT79Q5XKE5 535 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 WHAMMQ8TF30 809 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 TBC1D5Q92609 795 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 RAB34Q9BZG1 259 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 ZNF287Q9HBT7 754 aa13.85□□□□□ -0.19
LINC01561-201ENST00000369071 LUC7LQ9NQ29 371 aaKnown RBP13.85□□□□□ -0.19
LINC01561-201ENST00000369071 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 hCG_1984214I3L0E3 225 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 TRAF5O00463 557 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 LSP1P33241 339 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 GUCY2FP51841 1108 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 TRADDQ15628 312 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 CCDC40Q4G0X9 1142 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 ZNF713Q8N859 430 aaPredicted RBP13.84□□□□□ -0.19
LINC01561-201ENST00000369071 CEP63Q96MT8 703 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 RTFDC1Q9BY42 306 aaPredicted RBP13.84□□□□□ -0.19
LINC01561-201ENST00000369071 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 EPN3Q9H201 632 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 YY1AP1Q9H869 796 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 TMEM59LQ9UK28 342 aa13.84□□□□□ -0.19
LINC01561-201ENST00000369071 A0A087X0T9 212 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 ZPR1O75312 459 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 FAM228BP0C875 321 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 MARSP56192 900 aaKnown RBP13.83□□□□□ -0.19
LINC01561-201ENST00000369071 SEPT2Q15019 361 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 SPATS2Q86XZ4 545 aaKnown RBP13.83□□□□□ -0.19
LINC01561-201ENST00000369071 TRIM59Q8IWR1 403 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 USP38Q8NB14 1042 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 CEP95Q96GE4 821 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 PACSIN1Q9BY11 444 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 AIPL1Q9NZN9 384 aa13.83□□□□□ -0.19
LINC01561-201ENST00000369071 PACSIN2Q9UNF0 486 aaPredicted RBP13.83□□□□□ -0.19
LINC01561-201ENST00000369071 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 SBF2Q86WG5 1849 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 RAD51CO43502 376 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 NR1D1P20393 614 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 HNRNPH1P31943 449 aaKnown RBP13.83□□□□□ -0.2
LINC01561-201ENST00000369071 HSPA9P38646 679 aaKnown RBP13.83□□□□□ -0.2
LINC01561-201ENST00000369071 FNTAP49354 379 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 DNA2P51530 1060 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 ADCY7P51828 1080 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 SWT1Q5T5J6 900 aaKnown RBP13.83□□□□□ -0.2
LINC01561-201ENST00000369071 FBXW10Q5XX13 1052 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 CNPY4Q8N129 248 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 COA7Q96BR5 231 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 ATP6V1G3Q96LB4 118 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 FGFBP2Q9BYJ0 223 aa13.83□□□□□ -0.2
LINC01561-201ENST00000369071 BTNL10A8MVZ5 291 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 CES2O00748 559 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 KCNQ2O43526 872 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 GNA14O95837 355 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 LDHCP07864 332 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 PTGISQ16647 500 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 KIAA0753Q2KHM9 967 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 FAM26FQ5R3K3 315 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 NAA35Q5VZE5 725 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 MCTP2Q6DN12 878 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 CCDC24Q8N4L8 307 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 GANQ9H2C0 597 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 POLD4Q9HCU8 107 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 PANK4Q9NVE7 773 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 THRAP3Q9Y2W1 955 aaKnown RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 PCDHA2Q9Y5H9 948 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 ATAD5Q96QE3 1844 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 HMGB1P1B2RPK0 211 aaPredicted RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 MEFVO15553 781 aaPredicted RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 PPP1R37O75864 691 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 TNNC1P63316 161 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 ITGB3BPQ13352 177 aaPredicted RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 SLC51AQ86UW1 340 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 ZC3H3Q8IXZ2 948 aaKnown RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 EIF1ADQ8N9N8 165 aaKnown RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 PRPF38AQ8NAV1 312 aaKnown RBP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC01561-201ENST00000369071 CEP89Q96ST8 783 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 ADAMTS1Q9UHI8 967 aa13.82□□□□□ -0.2
LINC01561-201ENST00000369071 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 BHMG1C9JSJ3 638 aaPredicted RBP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 FSBPO95073 299 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 PDHBP11177 359 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 ECHS1P30084 290 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 MDH1P40925 334 aaKnown RBP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 RNASE9P60153 205 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms