RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 SDF4Q9BRK5 362 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 LLPHQ9BRT6 129 aaKnown RBP21.09■□□□□ 0.97
CHTOP-202ENST00000368687 KCNH7Q9NS40 1196 aa21.09■□□□□ 0.97
CHTOP-202ENST00000368687 GRIN2DO15399 1336 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 NFASCO94856 1347 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 MEIS1O00470 390 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 CD4P01730 458 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 RAG1P15918 1043 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 KCNA2P16389 499 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 MCM2P49736 904 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 USP11P51784 963 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 PSMC6P62333 389 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 NBPF20Q3BBV1 942 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 NECAB1Q8N987 351 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 PGBD1Q96JS3 809 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 BRMS1Q9HCU9 246 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 TBX21Q9UL17 535 aa21.08■□□□□ 0.97
CHTOP-202ENST00000368687 ZNF215Q9UL58 517 aaPredicted RBP21.08■□□□□ 0.97
CHTOP-202ENST00000368687 DOCK5Q9H7D0 1870 aa21.07■□□□□ 0.96
CHTOP-202ENST00000368687 LARGE1O95461 756 aa21.07■□□□□ 0.96
CHTOP-202ENST00000368687 CTDNEP1O95476 244 aa21.07■□□□□ 0.96
CHTOP-202ENST00000368687 NSUN7Q8NE18 718 aaKnown RBP21.07■□□□□ 0.96
CHTOP-202ENST00000368687 PHF20Q9BVI0 1012 aa21.07■□□□□ 0.96
CHTOP-202ENST00000368687 JPH1Q9HDC5 661 aaPredicted RBP21.07■□□□□ 0.96
CHTOP-202ENST00000368687 TRIM43BA6NCK2 446 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 CIITAP33076 1130 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 HMGN5P82970 282 aaKnown RBP21.06■□□□□ 0.96
CHTOP-202ENST00000368687 MDM2Q00987 491 aaPredicted RBP21.06■□□□□ 0.96
CHTOP-202ENST00000368687 TRIM29Q14134 588 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 FAM47CQ5HY64 1035 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 KRT25Q7Z3Z0 450 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 C7orf31Q8N865 590 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 TRIM43Q96BQ3 446 aaPredicted RBP21.06■□□□□ 0.96
CHTOP-202ENST00000368687 GPR20Q99678 358 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 ALG1Q9BT22 464 aa21.06■□□□□ 0.96
CHTOP-202ENST00000368687 TIMP1P01033 207 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 PSEN2P49810 448 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 MFSD10Q14728 455 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 PLA2G4DQ86XP0 818 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 SEPT1Q8WYJ6 367 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 KAT2BQ92831 832 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 UBE2OQ9C0C9 1292 aaKnown RBP21.05■□□□□ 0.96
CHTOP-202ENST00000368687 TCEAL9Q9UHQ7 104 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 NOD1Q9Y239 953 aa21.05■□□□□ 0.96
CHTOP-202ENST00000368687 H3BRB1 525 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 M0R2N6 131 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 HAS3O00219 553 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 SOX1O00570 391 aaPredicted RBP21.04■□□□□ 0.96
CHTOP-202ENST00000368687 B4GALT4O60513 344 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 ATP9AO75110 1047 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 LGALS2P05162 132 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 ZNF286BP0CG31 522 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 NONOQ15233 471 aaKnown RBP eCLIP21.04■□□□□ 0.96
CHTOP-202ENST00000368687 KIAA0753Q2KHM9 967 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 MOXD1Q6UVY6 613 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 SH3RF1Q7Z6J0 888 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 CCDC155Q8N6L0 562 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 RASGRP4Q8TDF6 673 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 TNPO1Q92973 898 aaKnown RBP21.04■□□□□ 0.96
CHTOP-202ENST00000368687 AIFM3Q96NN9 605 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 NAP1L4Q99733 375 aaKnown RBP21.04■□□□□ 0.96
CHTOP-202ENST00000368687 C16orf70Q9BSU1 422 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 BACH2Q9BYV9 841 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 TUT1Q9H6E5 874 aaKnown RBP21.04■□□□□ 0.96
CHTOP-202ENST00000368687 AGO4Q9HCK5 861 aaKnown RBP21.04■□□□□ 0.96
CHTOP-202ENST00000368687 TBC1D22BQ9NU19 505 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 SLC9A2Q9UBY0 812 aa21.04■□□□□ 0.96
CHTOP-202ENST00000368687 IGLV3-22A0A075B6J6 115 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 CCDC194A0A1B0GVG4 234 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 FAM86B1E9PN63 330 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 FAM86B2P0C5J1 330 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 TMEM199Q8N511 208 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 CYP2W1Q8TAV3 490 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 HIPK3Q9H422 1215 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 GTF2IRD1Q9UHL9 959 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 KIF3AQ9Y496 699 aa21.03■□□□□ 0.96
CHTOP-202ENST00000368687 IPO5O00410 1097 aaKnown RBP21.02■□□□□ 0.96
CHTOP-202ENST00000368687 SORBS3O60504 671 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 GNAT1P11488 350 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 FDPSP14324 419 aaKnown RBP21.02■□□□□ 0.96
CHTOP-202ENST00000368687 TCF7P36402 384 aaPredicted RBP21.02■□□□□ 0.96
CHTOP-202ENST00000368687 FPGSQ05932 587 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 NPY5RQ15761 445 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 MFSD5Q6N075 450 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 CCDC83Q8IWF9 413 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 TDHQ8IZJ6 230 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 TBCKQ8TEA7 893 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 BADQ92934 168 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 ZNF577Q9BSK1 485 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 TRPV6Q9H1D0 765 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 KAT6AQ92794 2004 aa21.02■□□□□ 0.96
CHTOP-202ENST00000368687 LAMA2P24043 3122 aaKnown RBP21.02■□□□□ 0.95
CHTOP-202ENST00000368687 EMSYQ7Z589 1322 aa21.02■□□□□ 0.95
CHTOP-202ENST00000368687 PITPNM1O00562 1244 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 ARP10275 920 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 GCFC2P16383 781 aaKnown RBP21.01■□□□□ 0.95
CHTOP-202ENST00000368687 KRT2P35908 639 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 CHMP4BP1P59074 171 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 SP4Q02446 784 aa21.01■□□□□ 0.95
CHTOP-202ENST00000368687 PPIGQ13427 754 aaKnown RBP eCLIP21.01■□□□□ 0.956e-9■□□□□ 9.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms