RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 GLT8D2Q9H1C3 349 aa21.7■■□□□ 1.06
CKS1B-203ENST00000368439 IL23AQ9NPF7 189 aa21.7■■□□□ 1.06
CKS1B-203ENST00000368439 JADE2Q9NQC1 790 aa21.7■■□□□ 1.06
CKS1B-203ENST00000368439 GTF2IRD1Q9UHL9 959 aa21.7■■□□□ 1.06
CKS1B-203ENST00000368439 ACRP10323 421 aa21.69■■□□□ 1.06
CKS1B-203ENST00000368439 AP3B2Q13367 1082 aa21.69■■□□□ 1.06
CKS1B-203ENST00000368439 HIC1Q14526 733 aa21.69■■□□□ 1.06
CKS1B-203ENST00000368439 PTGISQ16647 500 aa21.69■■□□□ 1.06
CKS1B-203ENST00000368439 SCLYQ96I15 445 aa21.69■■□□□ 1.06
CKS1B-203ENST00000368439 RNPC3Q96LT9 517 aaKnown RBP21.69■■□□□ 1.06
CKS1B-203ENST00000368439 SLC26A6Q9BXS9 759 aa21.69■■□□□ 1.06
CKS1B-203ENST00000368439 EHMT1Q9H9B1 1298 aa21.69■■□□□ 1.06
CKS1B-203ENST00000368439 LGALS2P05162 132 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 SREBF1P36956 1147 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 MTMR1Q13613 665 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 ZNF365Q70YC5 407 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 CYP2W1Q8TAV3 490 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 CRYGNQ8WXF5 182 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 DHX38Q92620 1227 aaKnown RBP21.68■■□□□ 1.06
CKS1B-203ENST00000368439 CDHR1Q96JP9 859 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 MXRA8Q9BRK3 442 aa21.68■■□□□ 1.06
CKS1B-203ENST00000368439 PITPNM1O00562 1244 aa21.67■■□□□ 1.06
CKS1B-203ENST00000368439 MAFGO15525 162 aa21.67■■□□□ 1.06
CKS1B-203ENST00000368439 C7orf31Q8N865 590 aa21.67■■□□□ 1.06
CKS1B-203ENST00000368439 GIMAP8Q8ND71 665 aaPredicted RBP21.67■■□□□ 1.06
CKS1B-203ENST00000368439 TET1Q8NFU7 2136 aa21.67■■□□□ 1.06
CKS1B-203ENST00000368439 H3BRB1 525 aa21.66■■□□□ 1.06
CKS1B-203ENST00000368439 NOP56O00567 594 aaKnown RBP21.66■■□□□ 1.06
CKS1B-203ENST00000368439 HOXC8P31273 242 aa21.66■■□□□ 1.06
CKS1B-203ENST00000368439 SMAD3P84022 425 aaKnown RBP21.66■■□□□ 1.06
CKS1B-203ENST00000368439 JAKMIP3Q5VZ66 844 aa21.66■■□□□ 1.06
CKS1B-203ENST00000368439 PSRC1Q6PGN9 363 aaPredicted RBP21.66■■□□□ 1.06
CKS1B-203ENST00000368439 Q7L0L9 218 aa21.66■■□□□ 1.06
CKS1B-203ENST00000368439 CCDC12Q8WUD4 166 aaPredicted RBP21.66■■□□□ 1.06
CKS1B-203ENST00000368439 TUT1Q9H6E5 874 aaKnown RBP21.66■■□□□ 1.06
CKS1B-203ENST00000368439 C6orf50Q9HD87 102 aa21.66■■□□□ 1.06
CKS1B-203ENST00000368439 KCNH7Q9NS40 1196 aa21.66■■□□□ 1.06
CKS1B-203ENST00000368439 GSTTP1A0A1W2PQM5 241 aa21.65■■□□□ 1.06
CKS1B-203ENST00000368439 ZNF200P98182 395 aaPredicted RBP21.65■■□□□ 1.06
CKS1B-203ENST00000368439 AKAP17AQ02040 695 aaKnown RBP21.65■■□□□ 1.06
CKS1B-203ENST00000368439 RBL2Q08999 1139 aa21.65■■□□□ 1.06
CKS1B-203ENST00000368439 STK3Q13188 491 aa21.65■■□□□ 1.06
CKS1B-203ENST00000368439 FAM109BQ6ICB4 259 aaPredicted RBP21.65■■□□□ 1.06
CKS1B-203ENST00000368439 HERVK_113Q902F9 699 aa21.65■■□□□ 1.06
CKS1B-203ENST00000368439 VPS54Q9P1Q0 977 aa21.65■■□□□ 1.06
CKS1B-203ENST00000368439 TPCN1Q9ULQ1 816 aa21.65■■□□□ 1.06
CKS1B-203ENST00000368439 NOD1Q9Y239 953 aa21.65■■□□□ 1.06
CKS1B-203ENST00000368439 MEIS1O00470 390 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 CYP3A4P08684 503 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 IQCF3P0C7M6 154 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 ARP10275 920 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 ARHGAP4P98171 946 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 SCRN1Q12765 414 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 BFSP2Q13515 415 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 TRIM71Q2Q1W2 868 aaKnown RBP21.64■■□□□ 1.05
CKS1B-203ENST00000368439 CEP55Q53EZ4 464 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 TRIM50Q86XT4 487 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 WNT8BQ93098 351 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 SH3GLB2Q9NR46 395 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 PKD2L1Q9P0L9 805 aa21.64■■□□□ 1.05
CKS1B-203ENST00000368439 CXXC1Q9P0U4 656 aaPredicted RBP21.64■■□□□ 1.05
CKS1B-203ENST00000368439 GBF1Q92538 1859 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 FGBP02675 491 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 GNA11P29992 359 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 AK2P54819 239 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 SP4Q02446 784 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 SSRP1Q08945 709 aaKnown RBP21.63■■□□□ 1.05
CKS1B-203ENST00000368439 GPNMBQ14956 572 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 RPUSD2Q8IZ73 545 aaKnown RBP21.63■■□□□ 1.05
CKS1B-203ENST00000368439 REXO1Q8N1G1 1221 aaKnown RBP21.63■■□□□ 1.05
CKS1B-203ENST00000368439 DEFB123Q8N688 67 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 CCDC148Q8NFR7 591 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 CAGE1Q8TC20 777 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 KAT6AQ92794 2004 aa21.63■■□□□ 1.05
CKS1B-203ENST00000368439 NFASCO94856 1347 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 IGLV3-22A0A075B6J6 115 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 FAM86B1E9PN63 330 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 EDIL3O43854 480 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 PFKFB2O60825 505 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 EIF5BO60841 1220 aaKnown RBP21.62■■□□□ 1.05
CKS1B-203ENST00000368439 FAM86B2P0C5J1 330 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 SMIM10L2AP0DMW4 78 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 SMIM10L2BP0DMW5 78 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 TCF7P36402 384 aaPredicted RBP21.62■■□□□ 1.05
CKS1B-203ENST00000368439 PTK7Q13308 1070 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 ITGB3BPQ13352 177 aaPredicted RBP21.62■■□□□ 1.05
CKS1B-203ENST00000368439 C8orf34Q49A92 452 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 UTP14CQ5TAP6 766 aaKnown RBP21.62■■□□□ 1.05
CKS1B-203ENST00000368439 MCTP2Q6DN12 878 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 TRAF7Q6Q0C0 670 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 NIPA1Q7RTP0 329 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 TRIM22Q8IYM9 498 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 RETREG2Q8NC44 543 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 RASGRP4Q8TDF6 673 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 AFAP1L1Q8TED9 768 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 SEPT1Q8WYJ6 367 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 RNPEPQ9H4A4 650 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 AGO4Q9HCK5 861 aaKnown RBP21.62■■□□□ 1.05
CKS1B-203ENST00000368439 MTMR10Q9NXD2 777 aa21.62■■□□□ 1.05
CKS1B-203ENST00000368439 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms