RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 PIK3C2AO00443 1686 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 DYNC1LI2O43237 492 aaPredicted RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 FGF19O95750 216 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 UBE2HP62256 183 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 TWF2Q6IBS0 349 aaKnown RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 NEK11Q8NG66 645 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 TRIM11Q96F44 468 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 TMEM39BQ9GZU3 492 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 JPH1Q9HDC5 661 aaPredicted RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 SH2B2O14492 632 aaPredicted RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 XKR3Q5GH77 459 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 ARL6IP4Q66PJ3 421 aaKnown RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 SDE2Q6IQ49 451 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 TRMT1LQ7Z2T5 733 aaKnown RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 RIOX2Q8IUF8 465 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 NUP58Q9BVL2 599 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
SSR2-202ENST00000368311 PCDHA10Q9Y5I2 948 aa9.13□□□□□ -0.95
SSR2-202ENST00000368311 GOLGA6L10A0A0M3HER8 536 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 A0A1B0GVL5 298 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 MOXD2PA6NHM9 499 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 GBP1P32455 592 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 LMAN1P49257 510 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 DCP1BQ8IZD4 617 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 NME8Q8N427 588 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 USP38Q8NB14 1042 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 APPL2Q8NEU8 664 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 PIGSQ96S52 555 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 MAK16Q9BXY0 300 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 C1orf112Q9NSG2 853 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 DIS3Q9Y2L1 958 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 CCDC175P0C221 793 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 IFNAR1P17181 557 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 AXLP30530 894 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 CYLC1P35663 651 aaPredicted RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 GSDMDP57764 484 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 ERVK-9P63128 1117 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 ERVK-24P63145 666 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 GUCY1B3Q02153 619 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 PPP4R3CPQ6ZMV5 832 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 GTF3C6Q969F1 213 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 CCDC97Q96F63 343 aaPredicted RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 SAMD11Q96NU1 681 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 TMEM47Q9BQJ4 181 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 TUFT1Q9NNX1 390 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 IPPQ9Y573 584 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 RPS6KA5O75582 802 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 GCNT3O95395 438 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 MOCS3O95396 460 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 KRT19P08727 400 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 HARSP12081 509 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 DEKP35659 375 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 PPM1AP35813 382 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 NNMTP40261 264 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 SEPT7Q16181 437 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 TDRD12Q587J7 1177 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 ZNF557Q8N988 423 aaPredicted RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 SPATC1LQ9H0A9 340 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 SRPRBQ9Y5M8 271 aaKnown RBP9.12□□□□□ -0.95
SSR2-202ENST00000368311 ADM5C9JUS6 153 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 ZW10O43264 779 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 IKBKEQ14164 716 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 PDIA6Q15084 440 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 GPBP1Q86WP2 473 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 MAP4K1Q92918 833 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 CCDC51Q96ER9 411 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 CPA4Q9UI42 421 aa9.12□□□□□ -0.95
SSR2-202ENST00000368311 CD4P01730 458 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 TNNI1P19237 187 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 ARHGAP4P98171 946 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 GIT2Q14161 759 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 ZNF174Q15697 407 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 ANO1Q5XXA6 986 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 SH3TC2Q8TF17 1288 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 MAIP1Q8WWC4 291 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 HVCN1Q96D96 273 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 MRPL4Q9BYD3 311 aaKnown RBP9.11□□□□□ -0.95
SSR2-202ENST00000368311 NCK2O43639 380 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 EZRP15311 586 aaKnown RBP9.11□□□□□ -0.95
SSR2-202ENST00000368311 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
SSR2-202ENST00000368311 FAM227BQ96M60 508 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 NAA15Q9BXJ9 866 aaKnown RBP9.11□□□□□ -0.95
SSR2-202ENST00000368311 OXCT2Q9BYC2 517 aaPredicted RBP9.11□□□□□ -0.95
SSR2-202ENST00000368311 PCDHB15Q9Y5E8 787 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 PLCH1Q4KWH8 1693 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 PLA2G6O60733 806 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 CAPN15O75808 1086 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 STAT5BP51692 787 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 EPHA7Q15375 998 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 HERC4Q5GLZ8 1057 aaPredicted RBP9.11□□□□□ -0.95
SSR2-202ENST00000368311 NOSTRINQ8IVI9 506 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 LSM7Q9UK45 103 aaKnown RBP9.11□□□□□ -0.95
SSR2-202ENST00000368311 COMMD10Q9Y6G5 202 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 MAP3K7O43318 606 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 CACNB3P54284 484 aa9.11□□□□□ -0.95
SSR2-202ENST00000368311 ZNF543Q08ER8 600 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms