RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 ELP1O95163 1332 aa21.23■□□□□ 0.99
LMNA-204ENST00000368298 MMP3P08254 477 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 U2AF2P26368 475 aaKnown RBP eCLIP21.22■□□□□ 0.99
LMNA-204ENST00000368298 FOSBP53539 338 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 GUCY1B3Q02153 619 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 NBR1Q14596 966 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 Q4G0T1 1027 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 C1orf53Q5VUE5 145 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 PPP4R3AQ6IN85 833 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 NEK8Q86SG6 692 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 SPRYD3Q8NCJ5 442 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 AGO4Q9HCK5 861 aaKnown RBP21.22■□□□□ 0.99
LMNA-204ENST00000368298 POLR3EQ9NVU0 708 aa21.22■□□□□ 0.99
LMNA-204ENST00000368298 PPFIA4O75335 1185 aa21.21■□□□□ 0.99
LMNA-204ENST00000368298 PURAQ00577 322 aaKnown RBP21.21■□□□□ 0.99
LMNA-204ENST00000368298 HSDL1Q3SXM5 330 aa21.21■□□□□ 0.99
LMNA-204ENST00000368298 CYFIP1Q7L576 1253 aa21.21■□□□□ 0.99
LMNA-204ENST00000368298 SPATA33Q96N06 139 aa21.21■□□□□ 0.99
LMNA-204ENST00000368298 NAP1L4Q99733 375 aaKnown RBP21.21■□□□□ 0.99
LMNA-204ENST00000368298 PDE4DIPQ5VU43 2346 aa21.21■□□□□ 0.99
LMNA-204ENST00000368298 DOCK5Q9H7D0 1870 aa21.21■□□□□ 0.99
LMNA-204ENST00000368298 GCFC2P16383 781 aaKnown RBP21.2■□□□□ 0.98
LMNA-204ENST00000368298 SNX17Q15036 470 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 DGKDQ16760 1214 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 PRR16Q569H4 304 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 SLC39A5Q6ZMH5 540 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 GLT1D1Q96MS3 346 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 HTATIP2Q9BUP3 242 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 IPO5O00410 1097 aaKnown RBP21.2■□□□□ 0.98
LMNA-204ENST00000368298 DHX15O43143 795 aaKnown RBP21.2■□□□□ 0.98
LMNA-204ENST00000368298 ITGB3BPQ13352 177 aaPredicted RBP21.2■□□□□ 0.98
LMNA-204ENST00000368298 LARP1BQ659C4 914 aaKnown RBP21.2■□□□□ 0.98
LMNA-204ENST00000368298 CXCL17Q6UXB2 119 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 FERMT2Q96AC1 680 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 GPR20Q99678 358 aa21.2■□□□□ 0.98
LMNA-204ENST00000368298 FAM205CA6NFA0 338 aa21.19■□□□□ 0.98
LMNA-204ENST00000368298 TDP2O95551 362 aa21.19■□□□□ 0.98
LMNA-204ENST00000368298 LETM2Q2VYF4 491 aa21.19■□□□□ 0.98
LMNA-204ENST00000368298 NOSTRINQ8IVI9 506 aa21.19■□□□□ 0.98
LMNA-204ENST00000368298 SEZ6LQ9BYH1 1024 aa21.19■□□□□ 0.98
LMNA-204ENST00000368298 STARD7Q9NQZ5 370 aa21.19■□□□□ 0.98
LMNA-204ENST00000368298 TBC1D22BQ9NU19 505 aa21.19■□□□□ 0.98
LMNA-204ENST00000368298 PDCP20941 246 aa21.18■□□□□ 0.98
LMNA-204ENST00000368298 SLC43A3Q8NBI5 491 aa21.18■□□□□ 0.98
LMNA-204ENST00000368298 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
LMNA-204ENST00000368298 ZNF577Q9BSK1 485 aa21.18■□□□□ 0.98
LMNA-204ENST00000368298 MTG1Q9BT17 334 aaPredicted RBP21.18■□□□□ 0.98
LMNA-204ENST00000368298 SLC9A2Q9UBY0 812 aa21.18■□□□□ 0.98
LMNA-204ENST00000368298 SCN10AQ9Y5Y9 1956 aa21.18■□□□□ 0.98
LMNA-204ENST00000368298 KIF28PB7ZC32 967 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 MSH4O15457 936 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 MYL3P08590 195 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 CDK7P50613 346 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 LRRC26Q2I0M4 334 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 SEPT1Q8WYJ6 367 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 RIT2Q99578 217 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 JPH1Q9HDC5 661 aaPredicted RBP21.17■□□□□ 0.98
LMNA-204ENST00000368298 DDX25Q9UHL0 483 aaKnown RBP21.17■□□□□ 0.98
LMNA-204ENST00000368298 ALPK3Q96L96 1907 aa21.17■□□□□ 0.98
LMNA-204ENST00000368298 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
LMNA-204ENST00000368298 GRIN2DO15399 1336 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 SORBS3O60504 671 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 ATG7O95352 703 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 ETNPPLQ8TBG4 499 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 KAT2BQ92831 832 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 SLC5A5Q92911 643 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 C16orf70Q9BSU1 422 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 PKD2L1Q9P0L9 805 aa21.16■□□□□ 0.98
LMNA-204ENST00000368298 A0A0U1RQG5 324 aaPredicted RBP21.15■□□□□ 0.98
LMNA-204ENST00000368298 GSTTP1A0A1W2PQM5 241 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 H3BQV1 296 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 TBX3O15119 743 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 SLC37A4O43826 429 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 CCNT1O60563 726 aaKnown RBP21.15■□□□□ 0.98
LMNA-204ENST00000368298 F2P00734 622 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 TRAPPC10P48553 1259 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 KCNMB3Q9NPA1 279 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 TELO2Q9Y4R8 837 aa21.15■□□□□ 0.98
LMNA-204ENST00000368298 ARVCFO00192 962 aa21.14■□□□□ 0.98
LMNA-204ENST00000368298 HAS3O00219 553 aa21.14■□□□□ 0.98
LMNA-204ENST00000368298 PSMD10O75832 226 aa21.14■□□□□ 0.98
LMNA-204ENST00000368298 ATN1P54259 1190 aaPredicted RBP21.14■□□□□ 0.98
LMNA-204ENST00000368298 ITGA7Q13683 1181 aa21.14■□□□□ 0.98
LMNA-204ENST00000368298 GNL2Q13823 731 aaKnown RBP21.14■□□□□ 0.98
LMNA-204ENST00000368298 ANKRD33Q7Z3H0 272 aa21.14■□□□□ 0.98
LMNA-204ENST00000368298 FAM20AQ96MK3 541 aa21.14■□□□□ 0.98
LMNA-204ENST00000368298 TOX2Q96NM4 488 aa21.14■□□□□ 0.98
LMNA-204ENST00000368298 CCNE2O96020 404 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 LGALS2P05162 132 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 TCF7P36402 384 aaPredicted RBP21.13■□□□□ 0.97
LMNA-204ENST00000368298 ACTR2P61160 394 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 ORC2Q13416 577 aaPredicted RBP21.13■□□□□ 0.97
LMNA-204ENST00000368298 ZNF746Q6NUN9 644 aaPredicted RBP21.13■□□□□ 0.97
LMNA-204ENST00000368298 VTI1AQ96AJ9 217 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 KATNAL1Q9BW62 490 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 CHMP5Q9NZZ3 219 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 MROH7Q68CQ1 1323 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 IGKV6D-21A0A0A0MT36 114 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 WNT7AO00755 349 aa21.13■□□□□ 0.97
LMNA-204ENST00000368298 SYT1P21579 422 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms