RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 C15orf40Q8WUR7 153 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 EIF4G1Q04637 1599 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC22O60826 627 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 VCLP18206 1134 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 HORMAD1Q86X24 394 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 A0A1W2PRG0 241 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ADCY6O43306 1168 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 XPAP23025 273 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 CTCFP49711 727 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 DDR1Q08345 913 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 LRRC36Q1X8D7 754 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 FBXO38Q6PIJ6 1188 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 STKLD1Q8NE28 680 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 MTSS1O43312 755 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 POLGP54098 1239 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SLC18A1P54219 525 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SYCE2Q6PIF2 218 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 DZIP3Q86Y13 1208 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 VCAM1P19320 739 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 CENPTQ96BT3 561 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 NUP88Q99567 741 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SYCE1LA8MT33 242 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 F13A1P00488 732 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ANKRD44Q8N8A2 993 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ARHGEF37A1IGU5 675 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 MKS1Q9NXB0 559 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF652Q9Y2D9 606 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 STK36Q9NRP7 1315 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ZSCAN20P17040 1043 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 LRRC49Q8IUZ0 686 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 TTC5Q8N0Z6 440 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 PHC3Q8NDX5 983 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 AIPL1Q9NZN9 384 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC61Q9Y6R9 512 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ETV6P41212 452 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 PACSIN1Q9BY11 444 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 KDM4CQ9H3R0 1056 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SH2D4AQ9H788 454 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SPTLC2O15270 562 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 UQCRFS1P1P0C7P4 283 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 KRT10P13645 584 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SF3B3Q15393 1217 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 E4F1Q66K89 784 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 AADATQ8N5Z0 425 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 DLG3Q92796 817 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 TRIM31Q9BZY9 425 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 GIT1Q9Y2X7 761 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 PIK3CBP42338 1070 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 TRMT10CQ7L0Y3 403 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 NAT9Q9BTE0 207 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 TMEM110-MUSTN1A8MSY1 372 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 RASSF9O75901 435 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 NTRK1P04629 796 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ST13P50502 369 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 LRRC63Q05C16 580 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 EAPPQ56P03 285 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 TTC29Q8NA56 475 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 NLRP7Q8WX94 980 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 FETUBQ9UGM5 382 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 APPL1Q9UKG1 709 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 CNOT3O75175 753 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ECE1P42892 770 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SUZ12Q15022 739 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 FBXO18Q8NFZ0 1043 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 HHATLQ9HCP6 504 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 DMAP1Q9NPF5 467 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 GID8Q9NWU2 228 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 GPN3Q9UHW5 284 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 WBP11Q9Y2W2 641 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ZFYVE27Q5T4F4 411 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SPATA17Q96L03 361 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 MYO1CO00159 1063 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ECEL1O95672 775 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 FOXP1Q9H334 677 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 LDHCP07864 332 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 NOL6Q9H6R4 1146 aaKnown RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 MAP3K7O43318 606 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 EFCAB14O75071 495 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ZC3H11AO75152 810 aaKnown RBP eCLIP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 MARCKSP29966 332 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ABL2P42684 1182 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 AMACRQ9UHK6 382 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ATP10BO94823 1461 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SSU72P8A0A1W2PR75 194 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 LIN9Q5TKA1 542 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 POLD4Q9HCU8 107 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF277Q9NRM2 450 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 PDE4BQ07343 736 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ZFAND2BQ8WV99 257 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 ATAD3AQ9NVI7 634 aa4.06□□□□□ -1.76
SYNE1-207ENST00000367255 CORO1CQ9ULV4 474 aaPredicted RBP4.06□□□□□ -1.76
SYNE1-207ENST00000367255 SMARCA1P28370 1054 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PYROXD1Q8WU10 500 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 PTBP2Q9UKA9 531 aaKnown RBP4.05□□□□□ -1.76
SYNE1-207ENST00000367255 SYCP2Q9BX26 1530 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 KRT20P35900 424 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 SLC38A10Q9HBR0 1119 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 UFL1O94874 794 aa4.05□□□□□ -1.76
SYNE1-207ENST00000367255 NPEPPSP55786 919 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms