RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 GRAPLQ8TC17 118 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 PSPC1Q8WXF1 523 aaKnown RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 PIGSQ96S52 555 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 JPH2Q9BR39 696 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-205ENST00000367251 LY9Q9HBG7 655 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 SERPINB13Q9UIV8 391 aa9.79□□□□□ -0.84
SYNE1-205ENST00000367251 SLC26A4O43511 780 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 YARSP54577 528 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 EXOSC10Q01780 885 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 MECOMQ03112 1051 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 PSMD6Q15008 389 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 EPHA10Q5JZY3 1008 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 DPP9Q86TI2 863 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 ACRBPQ8NEB7 543 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 DCAF4Q8WV16 495 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 PIGBQ92521 554 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 CSRNP1Q96S65 589 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 ACTR5Q9H9F9 607 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 OVOS2A0A0J9YW53 1432 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 OVOS2Q6IE36 1432 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 A0A087WUV0 522 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 SUN1O94901 812 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 EIF4A3P38919 411 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 USP14P54578 494 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 TBC1D10CQ8IV04 446 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 TRIM42Q8IWZ5 723 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 DHX40Q8IX18 779 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 ELOA2Q8IYF1 753 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 ARHGEF2Q92974 986 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 CEP72Q9P209 647 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 SEC31AO94979 1220 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 CCDC38Q502W7 563 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 RYBPQ8N488 228 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 TTC30BQ8N4P2 665 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 CCDC197Q8NCU1 140 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 TNS3Q68CZ2 1445 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 NCOA3Q9Y6Q9 1424 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 SART1O43290 800 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 LUC7L3O95232 432 aaKnown RBP9.78□□□□□ -0.84
SYNE1-205ENST00000367251 SLC12A2P55011 1212 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 IL9RQ01113 521 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 TMTC4Q5T4D3 741 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 FAM160B2Q86V87 743 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 GRAMD1CQ8IYS0 662 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 CDHR1Q96JP9 859 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 DPH5Q9H2P9 285 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 SLITRK6Q9H5Y7 841 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 TSPOAP1O95153 1857 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 A0A1W2PQC6 194 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 CASP8Q14790 479 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 RDH13Q8NBN7 331 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 GDAP1L1Q96MZ0 367 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 TUBB6Q9BUF5 446 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 ABHD10Q9NUJ1 306 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 SEPT10Q9P0V9 454 aa9.78□□□□□ -0.84
SYNE1-205ENST00000367251 CYP27B1O15528 508 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 PLA2G4BP0C869 781 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 PNMA6AP0CW24 399 aaPredicted RBP9.77□□□□□ -0.84
SYNE1-205ENST00000367251 ERCC3P19447 782 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 TFDP1Q14186 410 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 RHOT2Q8IXI1 618 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 SMYD4Q8IYR2 804 aaPredicted RBP9.77□□□□□ -0.84
SYNE1-205ENST00000367251 ZNF577Q9BSK1 485 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 EDEM3Q9BZQ6 932 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 EPB41L5Q9HCM4 733 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 NEDD4P46934 1319 aa9.77□□□□□ -0.84
SYNE1-205ENST00000367251 FBXO38Q6PIJ6 1188 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 FOXP4Q8IVH2 680 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-205ENST00000367251 PPM1KQ8N3J5 372 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 PPP4R1Q8TF05 950 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 CPDO75976 1380 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 GRID2IPA4D2P6 1211 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 MYO1FO00160 1098 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 ENC1O14682 589 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 ITKQ08881 620 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 BFSP1Q12934 665 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 GRM4Q14833 912 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 SYDE2Q5VT97 1194 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 SUSD4Q5VX71 490 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 PI16Q6UXB8 463 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 MAP7D3Q8IWC1 876 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 MRPL47Q9HD33 250 aaKnown RBP9.77□□□□□ -0.85
SYNE1-205ENST00000367251 CCPG1Q9ULG6 757 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 RRP15Q9Y3B9 282 aaKnown RBP9.77□□□□□ -0.85
SYNE1-205ENST00000367251 CAPN9O14815 690 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 ORC4O43929 436 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 BMP3P12645 472 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 ATP1A3P13637 1013 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 FOXO4P98177 505 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 KRT81Q14533 505 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 SNCBQ16143 134 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 CC2D2BQ6DHV5 1058 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 RINT1Q6NUQ1 792 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 ANKRD42Q8N9B4 389 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 COA1Q9GZY4 146 aa9.77□□□□□ -0.85
SYNE1-205ENST00000367251 TESPA1A2RU30 521 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-205ENST00000367251 HIP1RO75146 1068 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 ECEL1O95672 775 aa9.76□□□□□ -0.85
SYNE1-205ENST00000367251 ALAS1P13196 640 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms