RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 FBXW4P57775 412 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 BASP1P80723 227 aaKnown RBP16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 PDXDC2PQ6P474 469 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 THEGQ9P2T0 379 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 FIS1Q9Y3D6 152 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 USP17L3A6NCW0 530 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 USP17L4A6NCW7 530 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 SESN3P58005 492 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 ERFEQ4G0M1 354 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 BZW1Q7L1Q6 419 aaKnown RBP16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 USP17L1Q7RTZ2 530 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 PIGSQ96S52 555 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 EFHD1Q9BUP0 239 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 CAPS2Q9BXY5 557 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 EFCAB8A8MWE9 144 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 GABPB1Q06547 395 aaPredicted RBP16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 RCN2Q14257 317 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 GPR108Q9NPR9 543 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 PTH1RQ03431 593 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 TRIM68Q6AZZ1 485 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 DEPDC1BQ8WUY9 529 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 PPWD1Q96BP3 646 aaKnown RBP16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 PPP1R9AQ9ULJ8 1098 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
NUCKS1-201ENST00000367142 SLFN12LQ6IEE8 588 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 P2RX5Q93086 422 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 CALN1Q9BXU9 219 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 EPN1Q9Y6I3 576 aaPredicted RBP16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 PHLPP2Q6ZVD8 1323 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 NPR1P16066 1061 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 HOXA7P31268 230 aaPredicted RBP16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 CXorf38Q8TB03 319 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 EAF2Q96CJ1 260 aaPredicted RBP16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 ZSWIM6Q9HCJ5 1215 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 SUN1O94901 812 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 ATP1A2P50993 1020 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 YWHAHQ04917 246 aaPredicted RBP16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 GSDMAQ96QA5 445 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 MSTO1Q9BUK6 570 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 GUCY2DQ02846 1103 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 URGCPQ8TCY9 931 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 TBCKQ8TEA7 893 aa16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
NUCKS1-201ENST00000367142 PAMP19021 973 aa16.96■□□□□ 0.3
NUCKS1-201ENST00000367142 SNX1Q13596 522 aa16.96■□□□□ 0.3
NUCKS1-201ENST00000367142 STAG1Q8WVM7 1258 aa16.96■□□□□ 0.3
NUCKS1-201ENST00000367142 KRT82Q9NSB4 513 aa16.96■□□□□ 0.3
NUCKS1-201ENST00000367142 FANCLQ9NW38 375 aa16.96■□□□□ 0.3
NUCKS1-201ENST00000367142 PCDHA7Q9UN72 937 aa16.96■□□□□ 0.3
NUCKS1-201ENST00000367142 CD58P19256 250 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 TRIM67Q6ZTA4 783 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 CATSPER4Q7RTX7 472 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 KSR1Q8IVT5 923 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 UBE2TQ9NPD8 197 aaPredicted RBP16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 KCNQ3O43525 872 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 PDIA3P30101 505 aaKnown RBP16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 SEPT2Q15019 361 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 TBCCQ15814 346 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 MYRIPQ8NFW9 859 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 MTRQ99707 1265 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 PCGF5Q86SE9 256 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 CFAP36Q96G28 342 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 TMEM2Q9UHN6 1383 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 PPP6R2O75170 966 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 RWDD4Q6NW29 188 aaKnown RBP16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 C17orf53Q8N3J3 647 aaPredicted RBP16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 GIPC2Q8TF65 315 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 CLIC4Q9Y696 253 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 CLIC2O15247 247 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 TMED2Q15363 201 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 CDC37Q16543 378 aaPredicted RBP16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 MAN2A1Q16706 1144 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 PARVGQ9HBI0 331 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 CAPN7Q9Y6W3 813 aa16.95■□□□□ 0.3
NUCKS1-201ENST00000367142 SRGAP2CP0DJJ0 459 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 SCARA5Q6ZMJ2 495 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 GIMAP8Q8ND71 665 aaPredicted RBP16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 OR6B3Q8NGW1 331 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 FAM49AQ9H0Q0 323 aaPredicted RBP16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 ESRRBO95718 433 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 MT-ND3P03897 115 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 HOXD10P28358 340 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 TNFAIP2Q03169 654 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 DAAM1Q9Y4D1 1078 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 NPC1L1Q9UHC9 1359 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 LRRN2O75325 713 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 BRD1O95696 1058 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 MYL1P05976 194 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 FRA10AC1Q70Z53 315 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 MIGA2Q7L4E1 593 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 ZBTB18Q99592 522 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 XAB2Q9HCS7 855 aaKnown RBP16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 TAC1P20366 129 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 DYNLL1P63167 89 aaKnown RBP16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 HSP90AA5PQ58FG0 334 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 GCNT4Q9P109 453 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms