RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 PACSIN2Q9UNF0 486 aaPredicted RBP12.21□□□□□ -0.46
NSL1-202ENST00000366977 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.46
NSL1-202ENST00000366977 PVALEFA0A1B0GWK0 134 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 RSPH10B2B2RC85 870 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 PLA2G4BP0C869 781 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 RSPH10BP0C881 870 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 HOXA13P31271 388 aaPredicted RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 PDXDC1Q6P996 788 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 GPBP1Q86WP2 473 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 COL23A1Q86Y22 540 aaPredicted RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 SLF2Q8IX21 1173 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 SCFD1Q8WVM8 642 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 CCDC102AQ96A19 550 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 LSM14BQ9BX40 385 aaKnown RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 DMGDHQ9UI17 866 aaKnown RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 PCDHA1Q9Y5I3 950 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 A0A1W2PQJ5 194 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 KLRG2A4D1S0 409 aaPredicted RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 MEIS2O14770 477 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 CYP11B2P19099 503 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 RBM5P52756 815 aaKnown RBP eCLIP12.2□□□□□ -0.46
NSL1-202ENST00000366977 KCNA1Q09470 495 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 PDIA5Q14554 519 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 ASTE1Q2TB18 679 aaPredicted RBP12.2□□□□□ -0.46
NSL1-202ENST00000366977 COBLL1Q53SF7 1204 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 FAM26FQ5R3K3 315 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 MYOCDQ8IZQ8 938 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 LRRC1Q9BTT6 524 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 ANO3Q9BYT9 981 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 GOLPH3Q9H4A6 298 aa12.2□□□□□ -0.46
NSL1-202ENST00000366977 ZBTB39O15060 712 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 AKR1B10O60218 316 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 SYF2O95926 243 aaKnown RBP12.19□□□□□ -0.46
NSL1-202ENST00000366977 HOXD13P35453 343 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 RNASE9P60153 205 aaKnown RBP12.19□□□□□ -0.46
NSL1-202ENST00000366977 POLR2FP61218 127 aaKnown RBP12.19□□□□□ -0.46
NSL1-202ENST00000366977 CYP4A11Q02928 519 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 KIF5AQ12840 1032 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
NSL1-202ENST00000366977 CCDC40Q4G0X9 1142 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 PRR16Q569H4 304 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 SLFN13Q68D06 897 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 RETREG2Q8NC44 543 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
NSL1-202ENST00000366977 TBC1D5Q92609 795 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 DEF6Q9H4E7 631 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 AJAP1Q9UKB5 411 aaPredicted RBP12.19□□□□□ -0.46
NSL1-202ENST00000366977 QSER1Q2KHR3 1735 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 SFI1A8K8P3 1242 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 FAM86B1E9PN63 330 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 FAM86B2P0C5J1 330 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 HERC4Q5GLZ8 1057 aaPredicted RBP12.19□□□□□ -0.46
NSL1-202ENST00000366977 FIGNQ5HY92 759 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
NSL1-202ENST00000366977 SNX12Q9UMY4 172 aa12.19□□□□□ -0.46
NSL1-202ENST00000366977 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 ZSCAN5CA6NGD5 496 aaPredicted RBP12.18□□□□□ -0.46
NSL1-202ENST00000366977 OPLAHO14841 1288 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 MYBP10242 640 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 HNRNPH3P31942 346 aaKnown RBP12.18□□□□□ -0.46
NSL1-202ENST00000366977 MAGEA1P43355 309 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 UBXN2AP68543 259 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 SPA17Q15506 151 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 TDRD12Q587J7 1177 aaKnown RBP12.18□□□□□ -0.46
NSL1-202ENST00000366977 WDR93Q6P2C0 686 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 CATSPER3Q86XQ3 398 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 KSR1Q8IVT5 923 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 TEKT1Q969V4 418 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 KCTD10Q9H3F6 313 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 LCMT1Q9UIC8 334 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 COL4A3BPQ9Y5P4 624 aa12.18□□□□□ -0.46
NSL1-202ENST00000366977 G3V3G9 751 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 PRPF6O94906 941 aaKnown RBP12.17□□□□□ -0.46
NSL1-202ENST00000366977 FTCDO95954 541 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 NT5C2P49902 561 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 SPIRE1Q08AE8 756 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 TUBB2AQ13885 445 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 CACNA2D4Q7Z3S7 1137 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 OSBPL9Q96SU4 736 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 TUBB2BQ9BVA1 445 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 KCNMB3Q9NPA1 279 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 HPCAL4Q9UM19 191 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 A0A1W2PRG0 241 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 AGPSO00116 658 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 EML1O00423 815 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 ERLIN1O75477 346 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 CAPN2P17655 700 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 SLC9A1P19634 815 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
NSL1-202ENST00000366977 SLC12A3P55017 1021 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms