RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 AENQ8WTP8 325 aaKnown RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 RUBCNQ92622 972 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 KAT2BQ92831 832 aa16.28■□□□□ 0.2
PRKN-204ENST00000366896 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
PRKN-204ENST00000366896 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 NOVP48745 357 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 MMP14P50281 582 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 ITIH3Q06033 890 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.27■□□□□ 0.2
PRKN-204ENST00000366896 MTMR14Q8NCE2 650 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 NHEJ1Q9H9Q4 299 aaPredicted RBP16.27■□□□□ 0.2
PRKN-204ENST00000366896 C6orf50Q9HD87 102 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 DUSP10Q9Y6W6 482 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 TECP42680 631 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 DLGAP5Q15398 846 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 CENPPQ6IPU0 288 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 GBP6Q6ZN66 633 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 MMTAG2Q9BU76 263 aaKnown RBP16.27■□□□□ 0.2
PRKN-204ENST00000366896 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.2
PRKN-204ENST00000366896 PVALEFA0A1B0GWK0 134 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 PDE2AO00408 941 aaPredicted RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 PRLRP16471 622 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 LIG3P49916 1009 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 VAV2P52735 878 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 ZNF572Q7Z3I7 529 aaPredicted RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 NEK8Q86SG6 692 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 ZBED3Q96IU2 234 aaPredicted RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 CAPS2Q9BXY5 557 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 MYOZ2Q9NPC6 264 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 STK17AQ9UEE5 414 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 CNOT7Q9UIV1 285 aaKnown RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 SMCO2A6NFE2 343 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 EIF3HO15372 352 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRKN-204ENST00000366896 FKBP15Q5T1M5 1219 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 KIAA0895Q8NCT3 520 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 NEDD1Q8NHV4 660 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 PCMTD1Q96MG8 357 aaPredicted RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
PRKN-204ENST00000366896 PLAGL2Q9UPG8 496 aa16.26■□□□□ 0.19
PRKN-204ENST00000366896 ZNF185O15231 689 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 LCA5LO95447 670 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 BCAS4Q8TDM0 211 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 SH3GL2Q99962 352 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 NOC4LQ9BVI4 516 aaKnown RBP16.25■□□□□ 0.19
PRKN-204ENST00000366896 PLEKP08567 350 aaPredicted RBP16.25■□□□□ 0.19
PRKN-204ENST00000366896 NFIAQ12857 509 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 TMEM260Q9NX78 707 aa16.25■□□□□ 0.19
PRKN-204ENST00000366896 LOC102724159A0A0B4J2E5 919 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 MACROD2A1Z1Q3 448 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 GOLGA8KD6RF30 607 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 ZNF263O14978 683 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 DDNO94850 711 aaPredicted RBP16.24■□□□□ 0.19
PRKN-204ENST00000366896 FGFR1OPO95684 399 aaKnown RBP16.24■□□□□ 0.19
PRKN-204ENST00000366896 CACNB3P54284 484 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 KIF5AQ12840 1032 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 PWP2Q15269 919 aaKnown RBP16.24■□□□□ 0.19
PRKN-204ENST00000366896 GPIHBP1Q8IV16 184 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 TRIM58Q8NG06 486 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 CALML4Q96GE6 196 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 IDI2Q9BXS1 227 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 EDEM3Q9BZQ6 932 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 EHD4Q9H223 541 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 SLC39A2Q9NP94 309 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 EPHB6O15197 1021 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 EGFRP00533 1210 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 CDK8P49336 464 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRKN-204ENST00000366896 PICALMQ13492 652 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 KRT26Q7Z3Y9 468 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 CCDC91Q7Z6B0 441 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 CCDC84Q86UT8 332 aaPredicted RBP16.24■□□□□ 0.19
PRKN-204ENST00000366896 MMGT1Q8N4V1 131 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 RRP36Q96EU6 259 aaKnown RBP16.24■□□□□ 0.19
PRKN-204ENST00000366896 PIGSQ96S52 555 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 GPRC5DQ9NZD1 345 aa16.24■□□□□ 0.19
PRKN-204ENST00000366896 BIN2Q9UBW5 565 aaPredicted RBP16.24■□□□□ 0.19
PRKN-204ENST00000366896 WNT10BO00744 389 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 HNRNPH1P31943 449 aaKnown RBP16.23■□□□□ 0.19
PRKN-204ENST00000366896 GSCP56915 257 aaPredicted RBP16.23■□□□□ 0.19
PRKN-204ENST00000366896 C2orf54Q08AI8 447 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 CCDC70Q6NSX1 233 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 UNC13DQ70J99 1090 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 SMCR8Q8TEV9 937 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms