RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZDHHC9Q9Y397 364 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 TCP1P17987 556 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 HOOK2Q96ED9 719 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 ABCC2Q92887 1545 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 CUL1Q13616 776 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 PARP2Q9UGN5 583 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 E9PMD0 336 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 BRD8Q9H0E9 1235 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 TOM1L1O75674 476 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 TMC5Q6UXY8 1006 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 ATP6V1E2Q96A05 226 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 PAGR1Q9BTK6 254 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 MAGED2Q9UNF1 606 aaPredicted RBP11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
CDC42BPA-205ENST00000366769 FAM135BQ49AJ0 1406 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 IRAK1P51617 712 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 SFSWAPQ12872 951 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CHRNA2Q15822 529 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 LRRC37BQ96QE4 947 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 ICE1Q9Y2F5 2266 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 RSPH10B2B2RC85 870 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 RSPH10BP0C881 870 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 HLA-DPA1P20036 260 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 ANGPTL8Q6UXH0 198 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 TTC30AQ86WT1 665 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CATSPER2Q96P56 530 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 ZNF277Q9NRM2 450 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 MKL2Q9ULH7 1088 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CAPN11Q9UMQ6 739 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 PARP3Q9Y6F1 533 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 PPIP5K1Q6PFW1 1433 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 NEK9Q8TD19 979 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CCT8L1PA6NM43 557 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 KRT8P05787 483 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 LRRC14Q15048 493 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 RASSF3Q86WH2 238 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 NME9Q86XW9 330 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 ZKSCAN4Q969J2 545 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 EIF2AQ9BY44 585 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 MAP4P27816 1152 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 UBE3AQ05086 875 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 MRPL28Q13084 256 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 HACE1Q8IYU2 909 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 COG1Q8WTW3 980 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 PSD3Q9NYI0 1048 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 C15orf41Q9Y2V0 281 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 AOX1Q06278 1338 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 SEC24CP53992 1094 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CCZ1BP86790 482 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CCZ1P86791 482 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 TCP11X2Q5H9J9 407 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 OPTNQ96CV9 577 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 MDH1BQ5I0G3 518 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 ELMSAN1Q6PJG2 1045 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 RAPH1Q70E73 1250 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 UTS2BQ765I0 119 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 XAGE3Q8WTP9 111 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 H3BRJ5 948 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 ESRRAP11474 423 aaPredicted RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 P4HA1P13674 534 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 TRAPPC10P48553 1259 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 CCDC80Q76M96 950 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 TRIM59Q8IWR1 403 aa11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 LLPHQ9BRT6 129 aaKnown RBP11.91□□□□□ -0.5
CDC42BPA-205ENST00000366769 ATP5HO75947 161 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 INAQ16352 499 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 SLC17A8Q8NDX2 589 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 FMO2Q99518 471 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 FIS1Q9Y3D6 152 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 PECAM1P16284 738 aaPredicted RBP11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 CEP19Q96LK0 163 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 FGFR1OP2Q9NVK5 253 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 KNL1Q8NG31 2342 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 EXOC1LA0A1B0GW35 172 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 SGSM2O43147 1006 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 EIF4A3P38919 411 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 KBTBD12Q3ZCT8 623 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 SUGP1Q8IWZ8 645 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 CFAP36Q96G28 342 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 ZFYVE19Q96K21 471 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 CITO14578 2027 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 DNM2P50570 870 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 TRPV6Q9H1D0 765 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 EPHB1P54762 984 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 ATP8B2P98198 1209 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 TRIP11Q15643 1979 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 CEP55Q53EZ4 464 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 ARHGEF10LQ9HCE6 1279 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms