RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ZNF286BP0CG31 522 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 DNAJB1P25685 340 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 AVPR2P30518 371 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 RPS6P62753 249 aaKnown RBP10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 PDE4BQ07343 736 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 PDE4DQ08499 809 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 ADAM15Q13444 863 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 CBX2Q14781 532 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 PLEKHG4Q58EX7 1191 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 BRDTQ58F21 947 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 CHST3Q7LGC8 479 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 CLASRPQ8N2M8 674 aaKnown RBP10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 TOP1MTQ969P6 601 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 YME1L1Q96TA2 773 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 POP1Q99575 1024 aaKnown RBP10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 FSD1Q9BTV5 496 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 ADAM33Q9BZ11 813 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 IGFLR1Q9H665 355 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 CD207Q9UJ71 328 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 PCDHGA10Q9Y5H3 936 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 RAD50Q92878 1312 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
HMGB1P39-201ENST00000366304 ZFHX4Q86UP3 3567 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 DMXL1Q9Y485 3027 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 LOC102724159A0A0B4J2E5 919 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 FOXP2O15409 715 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 KRT37O76014 449 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 PARNO95453 639 aaKnown RBP10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 EYA4O95677 639 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 TSPY3P0CV98 308 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 TSPY8P0CW00 308 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 ARP10275 920 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 PWP2Q15269 919 aaKnown RBP10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 BTNL9Q6UXG8 535 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 RNF207Q6ZRF8 634 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 ADGRD2Q7Z7M1 963 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 SUGP1Q8IWZ8 645 aaKnown RBP10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 TBC1D5Q92609 795 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 DDX12PQ92771 950 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 SAMD11Q96NU1 681 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 COL20A1Q9P218 1284 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 DNAH14Q0VDD8 3507 aa10.05□□□□□ -0.8
HMGB1P39-201ENST00000366304 RSPH10B2B2RC85 870 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 C5orf67F2Z3F1 127 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 GPAA1O43292 621 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 GLP2RO95838 553 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 F2P00734 622 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 RSPH10BP0C881 870 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 CTNNB1P35222 781 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 NOVP48745 357 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 RRP1P56182 461 aaKnown RBP10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 KIAA0753Q2KHM9 967 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 SYDE2Q5VT97 1194 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 SEPT14Q6ZU15 432 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 SERINC5Q86VE9 423 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 C7orf31Q8N865 590 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 SEC62Q99442 399 aaKnown RBP10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 PRRX2Q99811 253 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 RC3H2Q9HBD1 1191 aaKnown RBP10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 PCDHGC5Q9Y5F6 944 aa10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 FRMPD2Q68DX3 1309 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P39-201ENST00000366304 MED19A0JLT2 244 aaPredicted RBP10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 NCK2O43639 380 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 GH1P01241 217 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 BMPR1AP36894 532 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 THPOP40225 353 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 TDO2P48775 406 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 SIGLEC14Q08ET2 396 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 PKN1Q16512 942 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 CCDC96Q2M329 555 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 ERMP1Q7Z2K6 904 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 IFNL3Q8IZI9 196 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 SMRP1Q8NCR6 262 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 PANK1Q8TE04 598 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 TAAR1Q96RJ0 339 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 GPCPD1Q9NPB8 672 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 STX8Q9UNK0 236 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 USP15Q9Y4E8 981 aaPredicted RBP10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 MYH7P12883 1935 aa10.03□□□□□ -0.8
HMGB1P39-201ENST00000366304 CACNA1BQ00975 2339 aa10.02□□□□□ -0.8
HMGB1P39-201ENST00000366304 SORBS3O60504 671 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 HOXD8P13378 290 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 CASTP20810 708 aaKnown RBP10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 HOXC8P31273 242 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 NBL1P41271 181 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 PPARAQ07869 468 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 DGKDQ16760 1214 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 TSHZ3Q63HK5 1081 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 TYW1BQ6NUM6 668 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 ADGRD1Q6QNK2 874 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 DNERQ8NFT8 737 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 VN1R2Q8NFZ6 395 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 APPBP2Q92624 585 aa10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 IFIH1Q9BYX4 1025 aaKnown RBP10.02□□□□□ -0.81
HMGB1P39-201ENST00000366304 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms