RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SOX9P48436 509 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 NANOS3P60323 173 aaKnown RBP4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 USP39Q53GS9 565 aaKnown RBP4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 GTF2IRD2BQ6EKJ0 949 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 GTF2IRD2Q86UP8 949 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 TRIM59Q8IWR1 403 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 DNAJC10Q8IXB1 793 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 DIO2Q92813 273 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 FAM89AQ96GI7 184 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 CSRNP2Q9H175 543 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 BTG4Q9NY30 223 aa4.06□□□□□ -1.76
RNU6-238P-201ENST00000363313 RAD17O75943 681 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 KNG1P01042 644 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 FPR2P25090 351 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 BCL6P41182 706 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 LSAMPQ13449 338 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 POLNQ7Z5Q5 900 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 NLRP10Q86W26 655 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 DTX3Q8N9I9 347 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 TMEM87AQ8NBN3 555 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 NUDT10Q8NFP7 164 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 NUDT11Q96G61 164 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 MRGPRX3Q96LB0 322 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 ZSWIM3Q96MP5 696 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 EPB41L1Q9H4G0 881 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 ZNF703Q9H7S9 590 aaPredicted RBP4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 SLC30A1Q9Y6M5 507 aa4.05□□□□□ -1.76
RNU6-238P-201ENST00000363313 KRIT1O00522 736 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 U2SURPO15042 1029 aaKnown RBP4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 PLSCR1O15162 318 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 DGKIO75912 1065 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 CSF2RBP32927 897 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 ZNF568Q3ZCX4 644 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 VASNQ6EMK4 673 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 KIAA1211LQ6NV74 962 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 MAMDC4Q6UXC1 1216 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 Q6ZSN1 163 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 TAX1BP1Q86VP1 789 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 NEIL1Q96FI4 390 aaPredicted RBP4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 GNRHR2Q96P88 292 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 PRRX2Q99811 253 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 ASH2LQ9UBL3 628 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 PCDHB10Q9UN67 800 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 WASF3Q9UPY6 502 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 NUB1Q9Y5A7 615 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 PCSK5Q92824 1860 aa4.04□□□□□ -1.76
RNU6-238P-201ENST00000363313 MEFVO15553 781 aaPredicted RBP4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 CUTAO60888 179 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 PEX11BO96011 259 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 MAKP20794 623 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 LTBRP36941 435 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 RAC3P60763 192 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 USP10Q14694 798 aaKnown RBP4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 NCAPHQ15003 741 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 LDLRAD1Q5T700 205 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 IGFL4Q6B9Z1 124 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 PROSER1Q86XN7 944 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 EXTL1Q92935 676 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 ZG16BQ96DA0 208 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 MYOTQ9UBF9 498 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 APEX2Q9UBZ4 518 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 TMEFF2Q9UIK5 374 aaPredicted RBP4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 TNFRSF18Q9Y5U5 241 aa4.03□□□□□ -1.76
RNU6-238P-201ENST00000363313 FBXO21O94952 628 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 ENO2P09104 434 aaPredicted RBP4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 ACO1P21399 889 aaKnown RBP4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 ACRV1P26436 265 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 DNAJA1P31689 397 aaKnown RBP4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 CYP4F3Q08477 520 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 HNRNPA0Q13151 305 aaKnown RBP4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 CCDC27Q2M243 656 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 VHLLQ6RSH7 139 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 C1orf210Q8IVY1 113 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 CCDC103Q8IW40 242 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 FUKQ8N0W3 1084 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 RCBTB1Q8NDN9 531 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 RASGRP4Q8TDF6 673 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 CACTINQ8WUQ7 758 aaKnown RBP4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 LRRC37BQ96QE4 947 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 CRAMP1Q96RY5 1269 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 BCL2L13Q9BXK5 485 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 CARD11Q9BXL7 1154 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 SLC6A20Q9NP91 592 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 GINM1Q9NU53 330 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 TIMELESSQ9UNS1 1208 aa4.02□□□□□ -1.77
RNU6-238P-201ENST00000363313 ADH4P08319 380 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 CR2P20023 1033 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 RPS19P39019 145 aaKnown RBP4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 TUBA3CQ13748 450 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 ZMAT1Q5H9K5 638 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 TUBA3EQ6PEY2 450 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 TMC5Q6UXY8 1006 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 MRGPRGQ86SM5 289 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 LDLRAD3Q86YD5 345 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 ULK2Q8IYT8 1036 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 KREMEN2Q8NCW0 462 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 SCYL1Q96KG9 808 aa4.01□□□□□ -1.77
RNU6-238P-201ENST00000363313 KCND1Q9NSA2 647 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms