RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
SSU72-202ENST00000359060 EXOC3L4Q17RC7 722 aa12.32□□□□□ -0.44
SSU72-202ENST00000359060 SFR1Q86XK3 245 aa12.32□□□□□ -0.44
SSU72-202ENST00000359060 CERS5Q8N5B7 392 aa12.32□□□□□ -0.44
SSU72-202ENST00000359060 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
SSU72-202ENST00000359060 JDP2Q8WYK2 163 aa12.32□□□□□ -0.44
SSU72-202ENST00000359060 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
SSU72-202ENST00000359060 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
SSU72-202ENST00000359060 ALAS1P13196 640 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 H2AFXP16104 143 aaPredicted RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 PPARDQ03181 441 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 EHHADHQ08426 723 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 HHIPL2Q6UWX4 724 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 FAM178BQ8IXR5 827 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 SUPT20HQ8NEM7 779 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 SH2D4AQ9H788 454 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 BCCIPQ9P287 314 aaKnown RBP eCLIP12.31□□□□□ -0.44
SSU72-202ENST00000359060 DDTLA6NHG4 134 aaPredicted RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 HSF2BPO75031 334 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 FTCDO95954 541 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 SMARCA1P28370 1054 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 SEMA6BQ9H3T3 888 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 PCDHAC2Q9Y5I4 1007 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 DUSP10Q9Y6W6 482 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 CEP104O60308 925 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 SHMT1P34896 483 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 FAM83BQ5T0W9 1011 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 KIAA0895Q8NCT3 520 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 DUSP9Q99956 384 aaKnown RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
SSU72-202ENST00000359060 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
SSU72-202ENST00000359060 TMEM110-MUSTN1A8MSY1 372 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 ZNF185O15231 689 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 ABL1P00519 1130 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
SSU72-202ENST00000359060 VSNL1P62760 191 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 NOA1Q8NC60 698 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 SELENOOQ9BVL4 669 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 KLRC4O43908 158 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 SLC35G1Q2M3R5 365 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 CFAP221Q4G0U5 840 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 ODR4Q5SWX8 454 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 RPGRIP1Q96KN7 1286 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 RABEP2Q9H5N1 569 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 SCAF8Q9UPN6 1271 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 BCL9LQ86UU0 1499 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 LRRC10BA6NIK2 292 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 ABCB4P21439 1286 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 KCNK18Q7Z418 384 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 EIF3CQ99613 913 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 LACRTQ9GZZ8 138 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 JRKLQ9Y4A0 524 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 CCDC169A6NNP5 214 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 ERLIN2O94905 339 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 SLC7A5Q01650 507 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 GSPT2Q8IYD1 628 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
SSU72-202ENST00000359060 GJA3Q9Y6H8 435 aa12.3□□□□□ -0.44
SSU72-202ENST00000359060 NWD2Q9ULI1 1742 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 NCK2O43639 380 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 HOXA10P31260 410 aaPredicted RBP12.29□□□□□ -0.44
SSU72-202ENST00000359060 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
SSU72-202ENST00000359060 KCNH2Q12809 1159 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 CASP8Q14790 479 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 RPS6KA1Q15418 735 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 BICD1Q96G01 975 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 PNMA5Q96PV4 448 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 MMS19Q96T76 1030 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 CCPG1Q9ULG6 757 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
SSU72-202ENST00000359060 KCNK3O14649 394 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 FLOT1O75955 427 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 STRIP1Q5VSL9 837 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 MCTP2Q6DN12 878 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 GLIS3Q8NEA6 775 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 BLOC1S4Q9NUP1 217 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 RSPH14Q9UHP6 348 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 FAN1Q9Y2M0 1017 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 TAF1P21675 1872 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 GAKO14976 1311 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 CCDC172P0C7W6 258 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms