RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 MAGEC3Q8TD91 643 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 LMBR1Q8WVP7 490 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 BRF1Q92994 677 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 FAM89AQ96GI7 184 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 TCEANC2Q96MN5 208 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 SCLT1Q96NL6 688 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 COA1Q9GZY4 146 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 ZBTB3Q9H5J0 574 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 ATP6V0A4Q9HBG4 840 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 IL1RAPL2Q9NP60 686 aa4.44□□□□□ -1.7
CNGA1-201ENST00000358519 SRP68Q9UHB9 627 aaKnown RBP4.44□□□□□ -1.7
CNGA1-201ENST00000358519 A0A1B0GVL5 298 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CTAGE9A4FU28 777 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 IKBKBO14920 756 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 MYO1BO43795 1136 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 ORC4O43929 436 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 KIF5CO60282 957 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 JAK2O60674 1132 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 PFKFB2O60825 505 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 BAG3O95817 575 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SERPINB2P05120 415 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SSBP05455 408 aaKnown RBP eCLIP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CCDC175P0C221 793 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 PRPHP41219 470 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 FXR1P51114 621 aaKnown RBP eCLIP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 NLRP12P59046 1061 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 AKAP17AQ02040 695 aaKnown RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 TUBB2AQ13885 445 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 MTF1Q14872 753 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 PLCB4Q15147 1175 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 PDCD2Q16342 344 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 WASHC4Q2M389 1173 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 EPHA10Q5JZY3 1008 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 ZNF569Q5MCW4 686 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 RNF187Q5TA31 235 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 THEMIS2Q5TEJ8 643 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CREB3L3Q68CJ9 461 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CIAPIN1Q6FI81 312 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 RPUSD2Q8IZ73 545 aaKnown RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 TC2NQ8N9U0 490 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CNBD1Q8NA66 436 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SPATA5Q8NB90 893 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 C3orf20Q8ND61 904 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 RSRC1Q96IZ7 334 aaKnown RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SH3GL2Q99962 352 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CRACR2AQ9BSW2 395 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 TUBB2BQ9BVA1 445 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 GLT8D2Q9H1C3 349 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SEMA6BQ9H3T3 888 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 BATF3Q9NR55 127 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 HOMER3Q9NSC5 361 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 A0A0U1RQJ8 604 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 PRAMEF22A3QJZ6 481 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SLC27A2O14975 620 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CD46P15529 392 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 GNAQP50148 359 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 RAB27AP51159 221 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 NDUFA8P51970 172 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 NAP1L1P55209 391 aaKnown RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 KCNH2Q12809 1159 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 TBX2Q13207 712 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 GAS6Q14393 721 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 C1QTNF12Q5T7M4 302 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 FKBP1CQ5VVH2 108 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CYB5D1Q6P9G0 228 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 MICALCLQ6ZW33 695 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CCDC50Q8IVM0 306 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 GPC2Q8N158 579 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 CCDC148Q8NFR7 591 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 ATRIPQ8WXE1 791 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 HOOK2Q96ED9 719 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 MASTLQ96GX5 879 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 NEK1Q96PY6 1258 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 USP28Q96RU2 1077 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 NAP1L4Q99733 375 aaKnown RBP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SWAP70Q9UH65 585 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 MYO6Q9UM54 1294 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.43□□□□□ -1.7
CNGA1-201ENST00000358519 FER1L6Q2WGJ9 1857 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 LOXHD1Q8IVV2 1947 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 PITPNM2Q9BZ72 1349 aa4.43□□□□□ -1.7
CNGA1-201ENST00000358519 SCO2A0A1W2PP80 73 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 TCRBV5S4A2TA0A5A2 114 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 GOLGA6BA6NDN3 693 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 DDAH1O94760 285 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NR3C2P08235 984 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SLC8A1P32418 973 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 EXOSC10Q01780 885 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NMIQ13287 307 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MTA1Q13330 715 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 TOB2Q14106 344 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 PTPRNQ16849 979 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 WHAMMP3Q1A5X7 153 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MYSM1Q5VVJ2 828 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CCDC102BQ68D86 513 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CAPRIN2Q6IMN6 1127 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 USP50Q70EL3 339 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 BRAPQ7Z569 592 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 FUKQ8N0W3 1084 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 OR8K1Q8NGG5 319 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms