RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 DUSP9Q99956 384 aaKnown RBP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 NYAP2Q9P242 653 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 MYH7BA7E2Y1 1941 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 BICDL2A1A5D9 508 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 SPDYE5A6NIY4 337 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 ZRANB2O95218 330 aaKnown RBP eCLIP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 EEF2P13639 858 aaKnown RBP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 CERKLQ49MI3 558 aaPredicted RBP15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 COBLL1Q53SF7 1204 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 SCYL3Q8IZE3 742 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 MB21D1Q8N884 522 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 GOLGA1Q92805 767 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 CDK5RAP3Q96JB5 506 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 TRIM34Q9BYJ4 488 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 ABHD10Q9NUJ1 306 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 BLOC1S4Q9NUP1 217 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 TSKSQ9UJT2 592 aa15.92■□□□□ 0.14
NIPAL3-203ENST00000358028 KIF20AO95235 890 aa15.91■□□□□ 0.14
NIPAL3-203ENST00000358028 ZBTB48P10074 688 aaPredicted RBP15.91■□□□□ 0.14
NIPAL3-203ENST00000358028 HOXA7P31268 230 aaPredicted RBP15.91■□□□□ 0.14
NIPAL3-203ENST00000358028 CNNM4Q6P4Q7 775 aa15.91■□□□□ 0.14
NIPAL3-203ENST00000358028 NUP88Q99567 741 aaPredicted RBP15.91■□□□□ 0.14
NIPAL3-203ENST00000358028 PSTPIP2Q9H939 334 aa15.91■□□□□ 0.14
NIPAL3-203ENST00000358028 KANSL2Q9H9L4 492 aa15.91■□□□□ 0.14
NIPAL3-203ENST00000358028 CTNND1O60716 968 aaKnown RBP15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 GCFC2P16383 781 aaKnown RBP15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 STK4Q13043 487 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 MCM6Q14566 821 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 QRICH1Q2TAL8 776 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 TMEM119Q4V9L6 283 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 SLFN13Q68D06 897 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 TATDN1Q6P1N9 297 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 CCDC84Q86UT8 332 aaPredicted RBP15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 CSGALNACT2Q8N6G5 542 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 CEP112Q8N8E3 955 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 ZNF507Q8TCN5 953 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 LARP4BQ92615 738 aaKnown RBP15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 RAD54LQ92698 747 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 NAP1L4Q99733 375 aaKnown RBP15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 GLT8D2Q9H1C3 349 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 DDX25Q9UHL0 483 aaKnown RBP15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 FHOD1Q9Y613 1164 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 CASP8AP2Q9UKL3 1982 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 POTEMA6NI47 508 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 RNF225M0QZC1 329 aaPredicted RBP15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 GDF11O95390 407 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 FCER1AP12319 257 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 CAP2P40123 477 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 ERVK-24P63145 666 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 JAG1P78504 1218 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 KRT79Q5XKE5 535 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 ANKRD40Q6AI12 368 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 UNC13DQ70J99 1090 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 FAM114A1Q8IWE2 563 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 SNX29Q8TEQ0 813 aa15.9■□□□□ 0.14
NIPAL3-203ENST00000358028 LOC285556D6RIA3 1793 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 PVALEFA0A1B0GWK0 134 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 MYMKA6NI61 221 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 POTEB2H3BUK9 544 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 IRF6O14896 467 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 RAD21O60216 631 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 PNMA6AP0CW24 399 aaPredicted RBP15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 SLC1A4P43007 532 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 TMEM179Q6ZVK1 233 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 SRGAP1Q7Z6B7 1085 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 KIAA0895Q8NCT3 520 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 LZTFL1Q9NQ48 299 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 PICK1Q9NRD5 415 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 CDC23Q9UJX2 597 aa15.89■□□□□ 0.13
NIPAL3-203ENST00000358028 CTAGE9A4FU28 777 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 PTPRAP18433 802 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 KRT9P35527 623 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 DNM2P50570 870 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 ICA1Q05084 483 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 PPATQ06203 517 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 PPIL2Q13356 520 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 SEPT2Q15019 361 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 CDC37Q16543 378 aaPredicted RBP15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 HAS1Q92839 578 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 NUDT12Q9BQG2 462 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 LRRC27Q9C0I9 530 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 SAGE1Q9NXZ1 904 aa15.88■□□□□ 0.13
NIPAL3-203ENST00000358028 CAPN15O75808 1086 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 ABCB5Q2M3G0 1257 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 SIAH1Q8IUQ4 282 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 OR8K1Q8NGG5 319 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 IQCDQ96DY2 449 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 CNOT6LQ96LI5 555 aaKnown RBP15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 DNAJC7Q99615 494 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 TUBGCP2Q9BSJ2 902 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 NUP58Q9BVL2 599 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 PCDHA1Q9Y5I3 950 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 B4DLN1 442 aa15.87■□□□□ 0.13
NIPAL3-203ENST00000358028 PES1O00541 588 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms