RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 MEIS1O00470 390 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CPLX1O14810 134 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ATP9AO75110 1047 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 F2P00734 622 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CYP3A4P08684 503 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SREBF1P36956 1147 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PSEN2P49810 448 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 EPHB4P54760 987 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SSRP1Q08945 709 aaKnown RBP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PPIGQ13427 754 aaKnown RBP eCLIP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CPLX2Q6PUV4 134 aaKnown RBP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 C16orf59Q7L2K0 433 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CYFIP1Q7L576 1253 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 NIPA1Q7RTP0 329 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 TRIM22Q8IYM9 498 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CRYGNQ8WXF5 182 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 GPR20Q99678 358 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 NOC4LQ9BVI4 516 aaKnown RBP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SLC26A6Q9BXS9 759 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SLKQ9H2G2 1235 aaPredicted RBP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 HIPK3Q9H422 1215 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 TRMT13Q9NUP7 481 aaKnown RBP9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 TPCN1Q9ULQ1 816 aa9.69□□□□□ -0.86
MAP1LC3C-201ENST00000357246 H3BRB1 525 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SOX1O00570 391 aaPredicted RBP9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PFKFB2O60825 505 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 DEXIO95424 95 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CSF2RAP15509 400 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 KCNA2P16389 499 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CYP2C18P33260 490 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 MTMR1Q13613 665 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 MFSD10Q14728 455 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PTGISQ16647 500 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 KIAA0753Q2KHM9 967 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CEP55Q53EZ4 464 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 FAM47CQ5HY64 1035 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 TMEM240Q5SV17 173 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 C9orf50Q5SZB4 431 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 GDF6Q6KF10 455 aaPredicted RBP9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 RPUSD2Q8IZ73 545 aaKnown RBP9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 C7orf31Q8N865 590 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SLC17A8Q8NDX2 589 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CCDC148Q8NFR7 591 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CYP2W1Q8TAV3 490 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 BICD2Q8TD16 824 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SEPT1Q8WYJ6 367 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CTAGE1Q96RT6 745 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ALG1Q9BT22 464 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ANO3Q9BYT9 981 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PPP1R12CQ9BZL4 782 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 TUT1Q9H6E5 874 aaKnown RBP9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 KCNH7Q9NS40 1196 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 TMEM260Q9NX78 707 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 HDAC6Q9UBN7 1215 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 GTF2IRD1Q9UHL9 959 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 MYO9BQ13459 2157 aa9.68□□□□□ -0.86
MAP1LC3C-201ENST00000357246 TET1Q8NFU7 2136 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 NFASCO94856 1347 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PITPNM1O00562 1244 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 NOP56O00567 594 aaKnown RBP9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ADAMTS3O15072 1205 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 LGALS2P05162 132 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CYP2C9P11712 490 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 NEK4P51957 841 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 AK2P54819 239 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ARHGAP4P98171 946 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SCRN1Q12765 414 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 STK3Q13188 491 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 BFSP2Q13515 415 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 C8orf34Q49A92 452 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 JAKMIP3Q5VZ66 844 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 GALNT17Q6IS24 598 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 REXO1Q8N1G1 1221 aaKnown RBP9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 RETREG2Q8NC44 543 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PGBD1Q96JS3 809 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 IL23AQ9NPF7 189 aa9.67□□□□□ -0.86
MAP1LC3C-201ENST00000357246 UMODL1Q5DID0 1318 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 GSTTP1A0A1W2PQM5 241 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 SORBS3O60504 671 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PPFIA3O75145 1194 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CDKL5O76039 1030 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ATG7O95352 703 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 FGBP02675 491 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PFKMP08237 780 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 IQCF3P0C7M6 154 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ZNF286BP0CG31 522 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 ARP10275 920 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 HOXC8P31273 242 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 HOXD11P31277 338 aaPredicted RBP9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CIITAP33076 1130 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 USP11P51784 963 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CCL23P55773 120 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 CHMP4BP1P59074 171 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 RBL2Q08999 1139 aa9.66□□□□□ -0.86
MAP1LC3C-201ENST00000357246 PTK7Q13308 1070 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms