RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 CCDC40Q4G0X9 1142 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 KLHDC7AQ5VTJ3 777 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
PTBP1-203ENST00000356948 FAM153AQ9UHL3 310 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
PTBP1-203ENST00000356948 A0A087X0T9 212 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 ZBTB39O15060 712 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 FAM228BP0C875 321 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 KLRC1P26715 233 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 ASTE1Q2TB18 679 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-203ENST00000356948 ARSHQ5FYA8 562 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 HERC4Q5GLZ8 1057 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-203ENST00000356948 TBC1D5Q92609 795 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 MYH7BA7E2Y1 1941 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 EIF3JO75822 258 aaKnown RBP16.84■□□□□ 0.29
PTBP1-203ENST00000356948 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 FAM114A1Q8IWE2 563 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 GUF1Q8N442 669 aaKnown RBP16.84■□□□□ 0.29
PTBP1-203ENST00000356948 SCFD1Q8WVM8 642 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-203ENST00000356948 JAG1P78504 1218 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 TUBB2AQ13885 445 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 TMEM266Q2M3C6 531 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 TMEM119Q4V9L6 283 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 FAM83BQ5T0W9 1011 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 PDXDC1Q6P996 788 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 GJB7Q6PEY0 223 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 TUBB2BQ9BVA1 445 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 SERPINB13Q9UIV8 391 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 AJAP1Q9UKB5 411 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-203ENST00000356948 GAKO14976 1311 aa16.84■□□□□ 0.29
PTBP1-203ENST00000356948 GLI1P08151 1106 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 SLC9A1P19634 815 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 PABPC4Q13310 644 aaKnown RBP eCLIP16.83■□□□□ 0.298e-16■■□□□ 12.2
PTBP1-203ENST00000356948 CRY2Q49AN0 593 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 KCTD16Q68DU8 428 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 CDC42EP5Q6NZY7 148 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 SH2D3CQ8N5H7 860 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 ZNF287Q9HBT7 754 aa16.83■□□□□ 0.29
PTBP1-203ENST00000356948 PALMO75781 387 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 GDF11O95390 407 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 HOXA13P31271 388 aaPredicted RBP16.83■□□□□ 0.28
PTBP1-203ENST00000356948 RAPGEF1Q13905 1077 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 FAM26FQ5R3K3 315 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 RETREG2Q8NC44 543 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 TTLL1O95922 423 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 HAUS3Q68CZ6 603 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
PTBP1-203ENST00000356948 GPBP1Q86WP2 473 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 KIAA0825Q8IV33 1275 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 FAM71BQ8TC56 605 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 ARL8AQ96BM9 186 aa16.83■□□□□ 0.28
PTBP1-203ENST00000356948 PNMA6FA0A0J9YX94 578 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 A0A1W2PQJ5 194 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 DDTLA6NHG4 134 aaPredicted RBP16.82■□□□□ 0.28
PTBP1-203ENST00000356948 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 NOVP48745 357 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 CLK2P49760 499 aaKnown RBP16.82■□□□□ 0.28
PTBP1-203ENST00000356948 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 RIC8AQ9NPQ8 531 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 PCDHA2Q9Y5H9 948 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 TACC1O75410 805 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 CARSP49589 748 aaKnown RBP16.82■□□□□ 0.28
PTBP1-203ENST00000356948 LIG3P49916 1009 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 SRLQ86TD4 932 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 SPICE1Q8N0Z3 855 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.82■□□□□ 0.28
PTBP1-203ENST00000356948 HNRNPH3P31942 346 aaKnown RBP16.82■□□□□ 0.28
PTBP1-203ENST00000356948 PRR16Q569H4 304 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 GOLGA5Q8TBA6 731 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 IFT81Q8WYA0 676 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 COL4A3BPQ9Y5P4 624 aa16.82■□□□□ 0.28
PTBP1-203ENST00000356948 PVALEFA0A1B0GWK0 134 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 KRT14P02533 472 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 HOXD13P35453 343 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 CASP4P49662 377 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 FIGNQ5HY92 759 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 TRIM58Q8NG06 486 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 AENQ8WTP8 325 aaKnown RBP16.81■□□□□ 0.28
PTBP1-203ENST00000356948 MAGEF1Q9HAY2 307 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 STK17AQ9UEE5 414 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 TULP1O00294 542 aaPredicted RBP16.81■□□□□ 0.28
PTBP1-203ENST00000356948 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
PTBP1-203ENST00000356948 CYP11B2P19099 503 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 UBXN2AP68543 259 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 APOBEC3HQ6NTF7 200 aaKnown RBP16.81■□□□□ 0.28
PTBP1-203ENST00000356948 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
PTBP1-203ENST00000356948 MYCBPQ99417 103 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms