RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 CMA1P23946 247 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 ADD1P35611 737 aaKnown RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 PAK2Q13177 524 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 VEPH1Q14D04 833 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 PROSER3Q2NL68 480 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 BEST2Q8NFU1 509 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 NEK9Q8TD19 979 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 DDX50Q9BQ39 737 aaKnown RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 GSTA1P08263 222 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 GSTA2P09210 222 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 RAB44Q7Z6P3 723 aaPredicted RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 OTUD7AQ8TE49 926 aaPredicted RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 UBN1Q9NPG3 1134 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 PRDM5Q9NQX1 630 aaPredicted RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 KRT76Q01546 638 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 CPDO75976 1380 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 ARHGAP4P98171 946 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 BFSP1Q12934 665 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 C8orf34Q49A92 452 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 YAF2Q8IY57 180 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 FAM76AQ8TAV0 307 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 ARPP19P56211 112 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 HHATQ5VTY9 493 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 KRT222Q8N1A0 295 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 FAM149B1Q96BN6 582 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 TDRD3Q9H7E2 651 aaKnown RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 CA4P22748 312 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 FKBP3Q00688 224 aaKnown RBP12.24□□□□□ -0.45
FN1-204ENST00000356005 VCXQ9H320 206 aa12.24□□□□□ -0.45
FN1-204ENST00000356005 USP32Q8NFA0 1604 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 NR2F2P24468 414 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 ATP6V0A4Q9HBG4 840 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 TRAPPC3O43617 180 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 KRT15P19012 456 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 ZBTB5O15062 677 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 LIFRP42702 1097 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 EIF2AK2P19525 551 aaKnown RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 PDIA3P30101 505 aaKnown RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 SLC16A2P36021 539 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 FAM186BQ8IYM0 893 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 SYMPKQ92797 1274 aaKnown RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 GJA10Q969M2 543 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 FAM49AQ9H0Q0 323 aaPredicted RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 HOMER3Q9NSC5 361 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 GINM1Q9NU53 330 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 MCF2LO15068 1137 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 PRPF3O43395 683 aaKnown RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 TAF1CQ15572 869 aaPredicted RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 LONRF2Q1L5Z9 754 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 FBXO18Q8NFZ0 1043 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 CCHCR1Q8TD31 782 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 GCOM2Q9BZD3 368 aaPredicted RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 EHD2Q9NZN4 543 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 SERTAD1Q9UHV2 236 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
FN1-204ENST00000356005 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
FN1-204ENST00000356005 CLDN3O15551 220 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 IFNB1P01574 187 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 AFPP02771 609 aaKnown RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 PPFIA1Q13136 1202 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 EFHBQ8N7U6 833 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 SH3RF3Q8TEJ3 882 aaPredicted RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 MTRQ99707 1265 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 MYO5BQ9ULV0 1848 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 ABCB4P21439 1286 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 STAG1Q8WVM7 1258 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 CETPP11597 493 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 KPNA2P52292 529 aaKnown RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 PNOCQ13519 176 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 HLFQ16534 295 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 CALR3Q96L12 384 aaKnown RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 ZNF189O75820 626 aaPredicted RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 RHOXF2BP0C7M4 288 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 DIXDC1Q155Q3 683 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 B4GALNT4Q76KP1 1039 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 PSPC1Q8WXF1 523 aaKnown RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 GSDMAQ96QA5 445 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 RHOXF2Q9BQY4 288 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 WDR46O15213 610 aaKnown RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 RASGRF1Q13972 1273 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 TADA2BQ86TJ2 420 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 H7C0C1 242 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 HUS1O60921 280 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 ACTN1P12814 892 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 ATP5OP48047 213 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 KIF1AQ12756 1690 aa12.22□□□□□ -0.45
FN1-204ENST00000356005 ARL6IP4Q66PJ3 421 aaKnown RBP12.22□□□□□ -0.45
FN1-204ENST00000356005 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms