RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 IFT88Q13099 833 aa13.33□□□□□ -0.28
TRPM3-201ENST00000354500 GADL1Q6ZQY3 521 aa13.33□□□□□ -0.28
TRPM3-201ENST00000354500 SULF1Q8IWU6 871 aa13.33□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF34Q8IZ26 560 aa13.33□□□□□ -0.28
TRPM3-201ENST00000354500 AZI2Q9H6S1 392 aa13.33□□□□□ -0.28
TRPM3-201ENST00000354500 UBE2TQ9NPD8 197 aaPredicted RBP13.33□□□□□ -0.28
TRPM3-201ENST00000354500 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
TRPM3-201ENST00000354500 STK38LQ9Y2H1 464 aa13.33□□□□□ -0.28
TRPM3-201ENST00000354500 SMIM22K7EJ46 135 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 SETDB1Q15047 1291 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 BPIFA3Q9BQP9 254 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 MAGEF1Q9HAY2 307 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 TXNDC16Q9P2K2 825 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
TRPM3-201ENST00000354500 NRXN1Q9ULB1 1477 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 ATP1A1P05023 1023 aaKnown RBP13.32□□□□□ -0.28
TRPM3-201ENST00000354500 TNS3Q68CZ2 1445 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 FMNL3Q8IVF7 1028 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 CTAGE3PQ8IX95 158 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 ANKRD35Q8N283 1001 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 BARHL2Q9NY43 387 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 SMARCAL1Q9NZC9 954 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 COL3A1P02461 1466 aaPredicted RBP13.32□□□□□ -0.28
TRPM3-201ENST00000354500 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
TRPM3-201ENST00000354500 PALMO75781 387 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 GAS8O95995 478 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 IGBP1P78318 339 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 GPSM2P81274 684 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
TRPM3-201ENST00000354500 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 TC2NQ8N9U0 490 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 FUCA2Q9BTY2 467 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 MKRN1Q9UHC7 482 aaKnown RBP13.32□□□□□ -0.28
TRPM3-201ENST00000354500 WDR19Q8NEZ3 1342 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 RFX7Q2KHR2 1363 aa13.32□□□□□ -0.28
TRPM3-201ENST00000354500 PSMC2P35998 433 aaKnown RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 ZKSCAN8Q15776 578 aaPredicted RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 HOOK2Q96ED9 719 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 NPHP3-ACAD11A0A0J9YXS1 232 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 VSNL1P62760 191 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 DHX9Q08211 1270 aaKnown RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 NAA25Q14CX7 972 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 SCYL2Q6P3W7 929 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 IQCDQ96DY2 449 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 TTLL3Q9Y4R7 772 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 STAT2P52630 851 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 EN1Q05925 392 aaPredicted RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 CYP4F22Q6NT55 531 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 UNC13DQ70J99 1090 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 FERMT1Q9BQL6 677 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 C1orf112Q9NSG2 853 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 PNPLA7Q6ZV29 1317 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 GCFC2P16383 781 aaKnown RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 OSTNP61366 133 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 QRICH1Q2TAL8 776 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF746Q6NUN9 644 aaPredicted RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 RIN2Q8WYP3 895 aaPredicted RBP13.31□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF653Q96CK0 615 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 PPP1R16BQ96T49 567 aa13.31□□□□□ -0.28
TRPM3-201ENST00000354500 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.3□□□□□ -0.28
TRPM3-201ENST00000354500 TADA3O75528 432 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 KLK7P49862 253 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 KCNH2Q12809 1159 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 PDCLQ13371 301 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 FAM83BQ5T0W9 1011 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 CASC4Q6P4E1 433 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 PHF20Q9BVI0 1012 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 SWAP70Q9UH65 585 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 TBK1Q9UHD2 729 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF148Q9UQR1 794 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 RRP15Q9Y3B9 282 aaKnown RBP13.3□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF131P52739 623 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
TRPM3-201ENST00000354500 NCAPG2Q86XI2 1143 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 GOLGA5Q8TBA6 731 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 CEP170P1Q96L14 293 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 PLA2G12BQ9BX93 195 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 PARVGQ9HBI0 331 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 ZBTB5O15062 677 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 STX2P32856 288 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 PDE6CP51160 858 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 NNTQ13423 1086 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 HHATQ5VTY9 493 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 TXNRD3Q86VQ6 643 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 ADGRF4Q8IZF3 695 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 TRIM9Q9C026 710 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms