RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 CHP1Q99653 195 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 SLF1Q9BQI6 1058 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 TAF1DQ9H5J8 278 aaPredicted RBP9.58□□□□□ -0.88
TRIM55-204ENST00000353317 TAB2Q9NYJ8 693 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 RWDD2AQ9UIY3 292 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 MAPK8IP1Q9UQF2 711 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 SNCAIPQ9Y6H5 919 aa9.58□□□□□ -0.88
TRIM55-204ENST00000353317 CTAGE15A4D2H0 777 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 CTAGE8P0CG41 777 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 KRT9P35527 623 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 BACE1P56817 501 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 AMPD2Q01433 879 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 PAK1Q13153 545 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 NCAPH2Q6IBW4 605 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 NEK8Q86SG6 692 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 CTAGE6Q86UF2 777 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 CTAGE4Q8IX94 777 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 CRYGNQ8WXF5 182 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 CUL5Q93034 780 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 DCPSQ96C86 337 aaKnown RBP9.57□□□□□ -0.88
TRIM55-204ENST00000353317 ZFP91Q96JP5 570 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-204ENST00000353317 SCN4AP35499 1836 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 KCNJ18B7U540 433 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 ERLIN1O75477 346 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 TUBB4BP68371 445 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 KCNJ12Q14500 433 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 WHAMMP3Q1A5X7 153 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 EAPPQ56P03 285 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-204ENST00000353317 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 MSL3Q8N5Y2 521 aaKnown RBP9.57□□□□□ -0.88
TRIM55-204ENST00000353317 ZNF280CQ8ND82 737 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 NELFBQ8WX92 580 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 WDR18Q9BV38 432 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 RPAP3Q9H6T3 665 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-204ENST00000353317 MYO1AQ9UBC5 1043 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 TRIM10Q9UDY6 481 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 FEZ2Q9UHY8 353 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-204ENST00000353317 REXO2Q9Y3B8 237 aaKnown RBP9.57□□□□□ -0.88
TRIM55-204ENST00000353317 AFG3L2Q9Y4W6 797 aa9.57□□□□□ -0.88
TRIM55-204ENST00000353317 CASP8Q14790 479 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 SLC30A10Q6XR72 485 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 LDHDQ86WU2 507 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 SULF1Q8IWU6 871 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 CYP2W1Q8TAV3 490 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 GOLGA5Q8TBA6 731 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 HAS1Q92839 578 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 CDCA5Q96FF9 252 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 MTMR9Q96QG7 549 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 FEM1BQ9UK73 627 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 MYO6Q9UM54 1294 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 GDAQ9Y2T3 454 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 TRAF5O00463 557 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 PLA2G6O60733 806 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 ACTN2P35609 894 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 PRCPP42785 496 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 MRPL12P52815 198 aaKnown RBP9.56□□□□□ -0.88
TRIM55-204ENST00000353317 UBXN1Q04323 297 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 ZNF658Q5TYW1 1059 aaPredicted RBP9.56□□□□□ -0.88
TRIM55-204ENST00000353317 IRF2BP1Q8IU81 584 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 CHURC1Q8WUH1 139 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 TANGO6Q9C0B7 1094 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 LCMT1Q9UIC8 334 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 FAN1Q9Y2M0 1017 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 RIPK3Q9Y572 518 aa9.56□□□□□ -0.88
TRIM55-204ENST00000353317 TTC26A0AVF1 554 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 TRIM49BA6NDI0 452 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 ENC1O14682 589 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 WDR46O15213 610 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 GTPBP6O43824 516 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 EIF3JO75822 258 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 NDUFA10O95299 355 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 SPAG1Q07617 926 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 TRIM14Q14142 442 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 SUPT20HL1Q3ZLR7 823 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 USP50Q70EL3 339 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 CPXCR1Q8N123 301 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 PURBQ96QR8 312 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 PLIN2Q99541 437 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 NUDT12Q9BQG2 462 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 MMTAG2Q9BU76 263 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 ANO3Q9BYT9 981 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 RAVER2Q9HCJ3 691 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 COL20A1Q9P218 1284 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 GUCA1BQ9UMX6 200 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 TFR2Q9UP52 801 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 EPN1Q9Y6I3 576 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 NFIBO00712 420 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 FLOT1O75955 427 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 CFBP00751 764 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 RPN1P04843 607 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 TECP42680 631 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 UBXN2AP68543 259 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 NAALADL2Q58DX5 795 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 NOL9Q5SY16 702 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 MAP1SQ66K74 1059 aaPredicted RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 ARL6IP4Q66PJ3 421 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms