RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 HHIPL2Q6UWX4 724 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 CTAGE6Q86UF2 777 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 CTAGE4Q8IX94 777 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 RIN2Q8WYP3 895 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-201ENST00000351288 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 FUT8Q9BYC5 575 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 RABEP2Q9H5N1 569 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 VPS18Q9P253 973 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 MYO6Q9UM54 1294 aa11.5□□□□□ -0.57
SMPD4-201ENST00000351288 GCOM1H8Y6P7 765 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 PPP1R11O60927 126 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 POLR2MP0CAP2 368 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 LMAN1P49257 510 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 CHURC1Q8WUH1 139 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 GLIS2Q9BZE0 524 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 NHEJ1Q9H9Q4 299 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 SH3GLB2Q9NR46 395 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 PICK1Q9NRD5 415 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 BUB1O43683 1085 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 PLA2G4BP0C869 781 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 GABPB1Q06547 395 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 GRB10Q13322 594 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 CT47A1Q5JQC4 288 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 HAUS3Q68CZ6 603 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 RABGGTAQ92696 567 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 HOOK2Q96ED9 719 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 LRRC10BA6NIK2 292 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 NCK2O43639 380 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 KSR1Q8IVT5 923 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 JAKMIP2Q96AA8 810 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 NAA15Q9BXJ9 866 aaKnown RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
SMPD4-201ENST00000351288 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
SMPD4-201ENST00000351288 ABCB11O95342 1321 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 ARHGEF35A5YM69 484 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 RHOBTB3O94955 611 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-201ENST00000351288 C2orf54Q08AI8 447 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 KIF5AQ12840 1032 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 BLOC1S4Q9NUP1 217 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 PRR12Q9ULL5 1215 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 LAMB2P55268 1798 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 SNED1Q8TER0 1413 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-201ENST00000351288 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
SMPD4-201ENST00000351288 ADAM9Q13443 819 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-201ENST00000351288 ZNF507Q8TCN5 953 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 BICD1Q96G01 975 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 PNMA5Q96PV4 448 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 CEP89Q96ST8 783 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 EDIL3O43854 480 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 TUBB4AP04350 444 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 CCNE1P24864 410 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 SLC7A5Q01650 507 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 CCSER1Q9C0I3 900 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
SMPD4-201ENST00000351288 ZNF263O14978 683 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 CETN3O15182 167 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 USO1O60763 962 aaKnown RBP11.47□□□□□ -0.57
SMPD4-201ENST00000351288 MOCS3O95396 460 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 EAPPQ56P03 285 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-201ENST00000351288 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 CENPHQ9H3R5 247 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 PCIF1Q9H4Z3 704 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 CCDC88AQ3V6T2 1871 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 ANKRD65E5RJM6 399 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 NR2F2P24468 414 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 CXCL9Q07325 125 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 LLGL1Q15334 1064 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 MIIPQ5JXC2 388 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 ZDHHC15Q96MV8 337 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 ZNF577Q9BSK1 485 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 LRRC27Q9C0I9 530 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 EHMT1Q9H9B1 1298 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 FAM53CQ9NYF3 392 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 PDE2AO00408 941 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-201ENST00000351288 DNM2P50570 870 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 RASSF7Q02833 373 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 CCDC70Q6NSX1 233 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 RSBN1LQ6PCB5 846 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-201ENST00000351288 PROCA1Q8NCQ7 364 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-201ENST00000351288 AK8Q96MA6 479 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 LSM14BQ9BX40 385 aaKnown RBP11.47□□□□□ -0.57
SMPD4-201ENST00000351288 RABGAP1Q9Y3P9 1069 aa11.47□□□□□ -0.57
SMPD4-201ENST00000351288 CAPN6Q9Y6Q1 641 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms