RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TTC4O95801 387 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 MTF1Q14872 753 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 KRT80Q6KB66 452 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 CCDC125Q86Z20 511 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 PPWD1Q96BP3 646 aaKnown RBP18.89■□□□□ 0.61
SPAST-202ENST00000345662 NGLY1Q96IV0 654 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 TTBK2Q6IQ55 1244 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 AFG3L2Q9Y4W6 797 aa18.89■□□□□ 0.61
SPAST-202ENST00000345662 SPAG7O75391 227 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 CORO7P57737 925 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 PTPN12Q05209 780 aaKnown RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 SDCCAG3Q96C92 435 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 SCYL1Q96KG9 808 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 CYTH2Q99418 400 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 GGA1Q9UJY5 639 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 WDR91A4D1P6 747 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 RASSF10A6NK89 507 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 GRAMD1BQ3KR37 738 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 ODR4Q5SWX8 454 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 NYAP1Q6ZVC0 841 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 EFHD1Q9BUP0 239 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 OSBPL1AQ9BXW6 950 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 TTC26A0AVF1 554 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 GPC4O75487 556 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 DLATP10515 647 aaKnown RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 GAP43P17677 238 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 FAM102BQ5T8I3 360 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 IRX2Q9BZI1 471 aaPredicted RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 ECT2Q9H8V3 914 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 EMILIN3Q9NT22 766 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 CYP4A11Q02928 519 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 PABPC4Q13310 644 aaKnown RBP eCLIP18.88■□□□□ 0.61
SPAST-202ENST00000345662 LLGL1Q15334 1064 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 SCYL2Q6P3W7 929 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 FAM47EQ6ZV65 393 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 DPF2Q92785 391 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 THOC1Q96FV9 657 aaKnown RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 KRT3P12035 628 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 MDH1P40925 334 aaKnown RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 GYG1P46976 350 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 SATB1Q01826 763 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 SPATA4Q8NEY3 305 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 RBM17Q96I25 401 aaKnown RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 CEP72Q9P209 647 aa18.88■□□□□ 0.61
SPAST-202ENST00000345662 PACSIN2Q9UNF0 486 aaPredicted RBP18.88■□□□□ 0.61
SPAST-202ENST00000345662 H7C0C1 242 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 PRPF6O94906 941 aaKnown RBP18.87■□□□□ 0.61
SPAST-202ENST00000345662 ATP5OP48047 213 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 TRIP13Q15645 432 aaPredicted RBP18.87■□□□□ 0.61
SPAST-202ENST00000345662 ZNF473Q8WTR7 871 aaKnown RBP18.87■□□□□ 0.61
SPAST-202ENST00000345662 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 TRIM55Q9BYV6 548 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 AZI2Q9H6S1 392 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 ETNK1Q9HBU6 452 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 RHOT2Q8IXI1 618 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 TRIM49BA6NDI0 452 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 PMS2P54278 862 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 ARHGAP18Q8N392 663 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 TBCKQ8TEA7 893 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 LRRC53A6NM62 1247 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 DYDC2Q96IM9 177 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
SPAST-202ENST00000345662 APOEP02649 317 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
SPAST-202ENST00000345662 PRR29P0C7W0 189 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 P4HA1P13674 534 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 CASP1P29466 404 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 LRRC37BQ96QE4 947 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 IGSF1Q8N6C5 1336 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 TRIML2Q8N7C3 387 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 CEP70Q8NHQ1 597 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 MAML1Q92585 1016 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 CCT8L2Q96SF2 557 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 HAUS8Q9BT25 410 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 STK36Q9NRP7 1315 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 DEUP1Q05D60 604 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 RINT1Q6NUQ1 792 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 ATG3Q9NT62 314 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 A0A0G2JND7 137 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 NCK2O43639 380 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 PLS3P13797 630 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 LIG4P49917 911 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 RAD23BP54727 409 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 ZFP69BQ9UJL9 534 aa18.86■□□□□ 0.61
SPAST-202ENST00000345662 SYNGAP1Q96PV0 1343 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 GCFC2P16383 781 aaKnown RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 PRCPP42785 496 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 RWDD2BP57060 319 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 CACNB1Q02641 598 aaPredicted RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 HAUS2Q9NVX0 235 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 MIF4GDA9UHW6 222 aaKnown RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 PHKG2P15735 406 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 GFPT1Q06210 699 aaPredicted RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 NR1H3Q13133 447 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 ATG16L1Q676U5 607 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 TBC1D22AQ8WUA7 517 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 MMS19Q96T76 1030 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 SERPINI1Q99574 410 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms