RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 TRMT13Q9NUP7 481 aaKnown RBP22.68■■□□□ 1.22
CLTA-202ENST00000345519 SOX1O00570 391 aaPredicted RBP22.67■■□□□ 1.22
CLTA-202ENST00000345519 ATP9AO75110 1047 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 DEXIO95424 95 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 EPHB4P54760 987 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 TRIM22Q8IYM9 498 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 MXRA8Q9BRK3 442 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 WNT8AQ9H1J5 351 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 HIPK3Q9H422 1215 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 C6orf50Q9HD87 102 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 TMEM260Q9NX78 707 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 GTF2IRD1Q9UHL9 959 aa22.67■■□□□ 1.22
CLTA-202ENST00000345519 NFASCO94856 1347 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 UMODL1Q5DID0 1318 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 M0R2N6 131 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 MEIS1O00470 390 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 PITPNM1O00562 1244 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 ZNF286BP0CG31 522 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 PSEN2P49810 448 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 AKAP17AQ02040 695 aaKnown RBP22.66■■□□□ 1.22
CLTA-202ENST00000345519 NPY5RQ15761 445 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 CEP55Q53EZ4 464 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 CYFIP1Q7L576 1253 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 REXO1Q8N1G1 1221 aaKnown RBP22.66■■□□□ 1.22
CLTA-202ENST00000345519 BICD2Q8TD16 824 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 PGBD1Q96JS3 809 aa22.66■■□□□ 1.22
CLTA-202ENST00000345519 LARP6Q9BRS8 491 aaKnown RBP22.66■■□□□ 1.22
CLTA-202ENST00000345519 IGLV3-22A0A075B6J6 115 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 LGALS2P05162 132 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 ARHGAP4P98171 946 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 SSRP1Q08945 709 aaKnown RBP22.65■■□□□ 1.22
CLTA-202ENST00000345519 PPIGQ13427 754 aaKnown RBP eCLIP22.65■■□□□ 1.22
CLTA-202ENST00000345519 MFSD10Q14728 455 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 KIAA0753Q2KHM9 967 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 C9orf50Q5SZB4 431 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 RASIP1Q5U651 963 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 CPLX2Q6PUV4 134 aaKnown RBP22.65■■□□□ 1.22
CLTA-202ENST00000345519 DAGLBQ8NCG7 672 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 VWCEQ96DN2 955 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 KIF2CQ99661 725 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 KCNH7Q9NS40 1196 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 MICAL3Q7RTP6 2002 aa22.65■■□□□ 1.22
CLTA-202ENST00000345519 CPLX1O14810 134 aa22.64■■□□□ 1.21
CLTA-202ENST00000345519 SHHQ15465 462 aa22.64■■□□□ 1.21
CLTA-202ENST00000345519 GDF6Q6KF10 455 aaPredicted RBP22.64■■□□□ 1.21
CLTA-202ENST00000345519 TMEM199Q8N511 208 aa22.64■■□□□ 1.21
CLTA-202ENST00000345519 CYP2W1Q8TAV3 490 aa22.64■■□□□ 1.21
CLTA-202ENST00000345519 VPS54Q9P1Q0 977 aa22.64■■□□□ 1.21
CLTA-202ENST00000345519 TELO2Q9Y4R8 837 aa22.64■■□□□ 1.21
CLTA-202ENST00000345519 LOXHD1Q8IVV2 1947 aa22.64■■□□□ 1.21
CLTA-202ENST00000345519 FAM86B1E9PN63 330 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 H3BRB1 525 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 CDKL5O76039 1030 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 CTDNEP1O95476 244 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 FAM86B2P0C5J1 330 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 CSF2RAP15509 400 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 CIITAP33076 1130 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 CYP2C18P33260 490 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 RBM25P49756 843 aaKnown RBP22.63■■□□□ 1.21
CLTA-202ENST00000345519 STK3Q13188 491 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 C16orf59Q7L2K0 433 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 GTF3C6Q969F1 213 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 PPP1R12CQ9BZL4 782 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 SLKQ9H2G2 1235 aaPredicted RBP22.63■■□□□ 1.21
CLTA-202ENST00000345519 TUT1Q9H6E5 874 aaKnown RBP22.63■■□□□ 1.21
CLTA-202ENST00000345519 HDAC6Q9UBN7 1215 aa22.63■■□□□ 1.21
CLTA-202ENST00000345519 EYSQ5T1H1 3165 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 CHD7Q9P2D1 2997 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 EMSYQ7Z589 1322 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 NOP56O00567 594 aaKnown RBP22.62■■□□□ 1.21
CLTA-202ENST00000345519 EDIL3O43854 480 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 PPFIA3O75145 1194 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 LARGE1O95461 756 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 ME3Q16798 604 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 FAM47CQ5HY64 1035 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 JAKMIP3Q5VZ66 844 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 GALNT17Q6IS24 598 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 CAGE1Q8TC20 777 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 IL23AQ9NPF7 189 aa22.62■■□□□ 1.21
CLTA-202ENST00000345519 TRANK1O15050 2925 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 SORBS3O60504 671 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 CYP2C9P11712 490 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 NEK4P51957 841 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 ITGB3BPQ13352 177 aaPredicted RBP22.61■■□□□ 1.21
CLTA-202ENST00000345519 HIC1Q14526 733 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 PTGISQ16647 500 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 TMEM240Q5SV17 173 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 PSRC1Q6PGN9 363 aaPredicted RBP22.61■■□□□ 1.21
CLTA-202ENST00000345519 DHX38Q92620 1227 aaKnown RBP22.61■■□□□ 1.21
CLTA-202ENST00000345519 LRCH3Q96II8 777 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.61■■□□□ 1.217e-6■□□□□ 9.4
CLTA-202ENST00000345519 AGO4Q9HCK5 861 aaKnown RBP22.61■■□□□ 1.21
CLTA-202ENST00000345519 PCDHA4Q9UN74 947 aa22.61■■□□□ 1.21
CLTA-202ENST00000345519 GSTTP1A0A1W2PQM5 241 aa22.6■■□□□ 1.21
CLTA-202ENST00000345519 ARP10275 920 aa22.6■■□□□ 1.21
CLTA-202ENST00000345519 ADAM17P78536 824 aa22.6■■□□□ 1.21
CLTA-202ENST00000345519 SETQ01105 290 aaPredicted RBP22.6■■□□□ 1.21
CLTA-202ENST00000345519 C7orf31Q8N865 590 aa22.6■■□□□ 1.21
CLTA-202ENST00000345519 PPP1R13LQ8WUF5 828 aa22.6■■□□□ 1.21
CLTA-202ENST00000345519 LENG9Q96B70 501 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms