RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 DCCP43146 1447 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 NSFP46459 744 aaKnown RBP17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 ATP2C1P98194 919 aaPredicted RBP17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 CCDC14Q49A88 953 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 FBF1Q8TES7 1133 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 FAM20AQ96MK3 541 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 PANX2Q96RD6 677 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 WRNIP1Q96S55 665 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 MTMR4Q9NYA4 1195 aa17.06■□□□□ 0.32
CARMIL3-201ENST00000342740 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 CYP27A1Q02318 531 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 SPP2Q13103 211 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 TFDP1Q14186 410 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 STRIP1Q5VSL9 837 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 ARMC9Q7Z3E5 817 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 SENP2Q9HC62 589 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 GCNT4Q9P109 453 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 TRIM49BA6NDI0 452 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 E9PMD0 336 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 PRCPP42785 496 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 BPIFB4P59827 614 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 PPP2R5EQ16537 467 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 ADAT2Q7Z6V5 191 aaKnown RBP17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 FAM133AQ8N9E0 248 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 OSBPL5Q9H0X9 879 aaPredicted RBP17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 SAMD15Q9P1V8 674 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 NDUFA10O95299 355 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 TDP2O95551 362 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 IFNB1P01574 187 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 PIK3CAP42336 1068 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 GUCY2FP51841 1108 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 LACTBP83111 547 aaPredicted RBP17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 PPFIA1Q13136 1202 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 RNF169Q8NCN4 708 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
CARMIL3-201ENST00000342740 FOXN1O15353 648 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 EIF4A3P38919 411 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 SRGAP1Q7Z6B7 1085 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 RAVER2Q9HCJ3 691 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 FEM1BQ9UK73 627 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 VIMP08670 466 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 CNGA1P29973 690 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 ORC2Q13416 577 aaPredicted RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 PPP1R21Q6ZMI0 780 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 PVALEFA0A1B0GWK0 134 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 PSAPP07602 524 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 OAS2P29728 719 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 KRT71Q3SY84 523 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 PABPN1LA6NDY0 278 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 NDUFAB1O14561 156 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 FDPSP14324 419 aaKnown RBP17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 C6orf163Q5TEZ5 329 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 CROCCP2Q86T23 111 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 RABGGTAQ92696 567 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 HINFPQ9BQA5 517 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
CARMIL3-201ENST00000342740 FAM205CA6NFA0 338 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 MXI1P50539 228 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 MTMR3Q13615 1198 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 NHEJ1Q9H9Q4 299 aaPredicted RBP17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 SSX2IPQ9Y2D8 614 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 POTECB2RU33 542 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 MFAP3LO75121 409 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 POLR2BP30876 1174 aaKnown RBP17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 MTMR1Q13613 665 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 RASA3Q14644 834 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 TTBK2Q6IQ55 1244 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 PRPF38AQ8NAV1 312 aaKnown RBP17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 GFPT2O94808 682 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 PPARDQ03181 441 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 HESX1Q9UBX0 185 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 FBXO2Q9UK22 296 aaPredicted RBP17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 MYO1FO00160 1098 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 MESDQ14696 234 aa17.03■□□□□ 0.32
CARMIL3-201ENST00000342740 PXDNQ92626 1479 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 ARL1P40616 181 aaPredicted RBP17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 NAA35Q5VZE5 725 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 PROCA1Q8NCQ7 364 aaPredicted RBP17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 RAD54LQ92698 747 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 PHF20Q9BVI0 1012 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 POLD4Q9HCU8 107 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 CTDNEP1O95476 244 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 VPS41P49754 854 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 PEX3P56589 373 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 MXRA7P84157 204 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
CARMIL3-201ENST00000342740 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms