RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TXNDC9O14530 226 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 RASEFQ8IZ41 740 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 PPP1R12CQ9BZL4 782 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 EFCC1Q9HA90 598 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
UBE3B-202ENST00000342494 ZSWIM5Q9P217 1185 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 STK25O00506 426 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
UBE3B-202ENST00000342494 C1orf228Q6PIY5 440 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 LMNTD2Q8IXW0 634 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 EFCAB13Q8IY85 973 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 DNAAF3Q8N9W5 541 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 ATP6V1E2Q96A05 226 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 MMP1P03956 469 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 RASSF2P50749 326 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 ECE2O60344 883 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 EEF1GP26641 437 aaKnown RBP16.28■□□□□ 0.2
UBE3B-202ENST00000342494 MSTO1Q9BUK6 570 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 IRAK4Q9NWZ3 460 aa16.28■□□□□ 0.2
UBE3B-202ENST00000342494 FNDC3AQ9Y2H6 1198 aaKnown RBP16.28■□□□□ 0.2
UBE3B-202ENST00000342494 IGSF3O75054 1194 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 MXI1P50539 228 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 EPHB1P54762 984 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 TMTC4Q5T4D3 741 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 NSUN7Q8NE18 718 aaKnown RBP16.27■□□□□ 0.2
UBE3B-202ENST00000342494 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.2
UBE3B-202ENST00000342494 TDRD3Q9H7E2 651 aaKnown RBP16.27■□□□□ 0.2
UBE3B-202ENST00000342494 BUB1BO60566 1050 aaPredicted RBP16.27■□□□□ 0.2
UBE3B-202ENST00000342494 PLA2G4BP0C869 781 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 NR5A1Q13285 461 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 SEPT6Q14141 434 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 RAB44Q7Z6P3 723 aaPredicted RBP16.27■□□□□ 0.2
UBE3B-202ENST00000342494 CCDC170Q8IYT3 715 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 RUNDC3BQ96NL0 473 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.2
UBE3B-202ENST00000342494 ARHGAP42A6NI28 874 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 BNIP3LO60238 219 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 INHBAP08476 426 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 MAN2A1Q16706 1144 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 TSNAXIP1Q2TAA8 658 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 TCP11Q8WWU5 503 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 SPATA31A3Q5VYP0 1347 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 GPC4O75487 556 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 IFNAR1P17181 557 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 STXBP2Q15833 593 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 PHLDB2Q86SQ0 1253 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 SPDYE1Q8NFV5 336 aaPredicted RBP16.27■□□□□ 0.19
UBE3B-202ENST00000342494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.27■□□□□ 0.19
UBE3B-202ENST00000342494 GDAP1Q8TB36 358 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 KLHL14Q9P2G3 628 aa16.27■□□□□ 0.19
UBE3B-202ENST00000342494 CTTNQ14247 550 aaKnown RBP16.26■□□□□ 0.19
UBE3B-202ENST00000342494 IQCB1Q15051 598 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 SCARA5Q6ZMJ2 495 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 PODNQ7Z5L7 613 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 MRPL47Q9HD33 250 aaKnown RBP16.26■□□□□ 0.19
UBE3B-202ENST00000342494 POLR3EQ9NVU0 708 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 MCF2LO15068 1137 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 UBE2TQ9NPD8 197 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-202ENST00000342494 MAGOHBQ96A72 148 aaKnown RBP16.26■□□□□ 0.19
UBE3B-202ENST00000342494 KRT1P04264 644 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 HLFQ16534 295 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 SH3RF3Q8TEJ3 882 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-202ENST00000342494 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 HOXD10P28358 340 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 CASP14P31944 242 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 ARHGAP25P42331 645 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 FAM83BQ5T0W9 1011 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 MAP3K21Q5TCX8 1036 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 SLFN12LQ6IEE8 588 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-202ENST00000342494 CALN1Q9BXU9 219 aa16.26■□□□□ 0.19
UBE3B-202ENST00000342494 MYL1P05976 194 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 ADRA2BP18089 450 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 CDC25AP30304 524 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 ALCAMQ13740 583 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 ZNF658Q5TYW1 1059 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-202ENST00000342494 KDM5CP41229 1560 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 JAK3P52333 1124 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 KIF23Q02241 960 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-202ENST00000342494 SEPT2Q15019 361 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 ARHGEF18Q6ZSZ5 1173 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 SYNE4Q8N205 404 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 RMDN3Q96TC7 470 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 MAGED2Q9UNF1 606 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-202ENST00000342494 INPP5FQ9Y2H2 1132 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 PRR36Q9H6K5 1346 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 OR6B3Q8NGW1 331 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 FAM167AQ96KS9 214 aa16.25■□□□□ 0.19
UBE3B-202ENST00000342494 DYNLT1P63172 113 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 SNRNP48Q6IEG0 339 aaKnown RBP16.24■□□□□ 0.19
UBE3B-202ENST00000342494 DGKHQ86XP1 1220 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 APOBEC3FQ8IUX4 373 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms