RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 GPBP1Q86WP2 473 aa14.51□□□□□ -0.09
COL18A1-201ENST00000342220 LRRC15Q8TF66 581 aa14.51□□□□□ -0.09
COL18A1-201ENST00000342220 LARP4BQ92615 738 aaKnown RBP14.51□□□□□ -0.09
COL18A1-201ENST00000342220 ZNF577Q9BSK1 485 aa14.51□□□□□ -0.09
COL18A1-201ENST00000342220 AS3MTQ9HBK9 375 aa14.51□□□□□ -0.09
COL18A1-201ENST00000342220 DACH1Q9UI36 760 aa14.51□□□□□ -0.09
COL18A1-201ENST00000342220 M0R2N6 131 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 IRF6O14896 467 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 ARP10275 920 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 PSMC6P62333 389 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 ECM1Q16610 540 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 GLIS3Q8NEA6 775 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 BAG1Q99933 345 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-201ENST00000342220 CARD6Q9BX69 1037 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 LAMB1P07942 1786 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 ARHGAP6O43182 974 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 PRCPP42785 496 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 TBX2Q13207 712 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-201ENST00000342220 DAGLBQ8NCG7 672 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 HAS1Q92839 578 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 MED15Q96RN5 788 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 WDR11Q9BZH6 1224 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 VPS33BQ9H267 617 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 BHMT2Q9H2M3 363 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 DLEC1Q9Y238 1755 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 TMEM150BA6NC51 233 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 STIM1Q13586 685 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 MORC3Q14149 939 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 TEX35Q5T0J7 233 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 RNF207Q6ZRF8 634 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 MNS1Q8NEH6 495 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 UBXN4Q92575 508 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 BCAS3Q9H6U6 928 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.5□□□□□ -0.093e-6■■■■■ 72.1
COL18A1-201ENST00000342220 SMCHD1A6NHR9 2005 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 MYH6P13533 1939 aa14.5□□□□□ -0.09
COL18A1-201ENST00000342220 ZSCAN12O43309 604 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 GTPBP6O43824 516 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-201ENST00000342220 ZNF18P17022 549 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 SARSP49591 514 aaKnown RBP14.49□□□□□ -0.09
COL18A1-201ENST00000342220 DPYDQ12882 1025 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 STK4Q13043 487 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 NAALADL2Q58DX5 795 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 TREML2Q5T2D2 321 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 FKBP1CQ5VVH2 108 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 TOGARAM2Q6ZUX3 1019 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 TC2NQ8N9U0 490 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 SRRTQ9BXP5 876 aaKnown RBP14.49□□□□□ -0.09
COL18A1-201ENST00000342220 PLIN4Q96Q06 1357 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
COL18A1-201ENST00000342220 SEPT14Q6ZU15 432 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 FAM160B2Q86V87 743 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 MLKLQ8NB16 471 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 SMCR8Q8TEV9 937 aaPredicted RBP14.49□□□□□ -0.09
COL18A1-201ENST00000342220 DDX12PQ92771 950 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 KLRG1Q96E93 195 aa14.49□□□□□ -0.09
COL18A1-201ENST00000342220 OPLAHO14841 1288 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 MSH4O15457 936 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 SPECC1LQ69YQ0 1117 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 ENOX1Q8TC92 643 aaKnown RBP14.48□□□□□ -0.09
COL18A1-201ENST00000342220 WDR24Q96S15 920 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 EPC1Q9H2F5 836 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 MYMKA6NI61 221 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 MTIF2P46199 727 aaKnown RBP14.48□□□□□ -0.09
COL18A1-201ENST00000342220 AMPD3Q01432 767 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 PAK1Q13153 545 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 GRB10Q13322 594 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 BMS1Q14692 1282 aaKnown RBP14.48□□□□□ -0.09
COL18A1-201ENST00000342220 NT5DC1Q5TFE4 455 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 ELOA2Q8IYF1 753 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-201ENST00000342220 MTMR14Q8NCE2 650 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 RRAGCQ9HB90 399 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 COL20A1Q9P218 1284 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 MAGEC2Q9UBF1 373 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-201ENST00000342220 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 CEP350Q5VT06 3117 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 ESYT2A0FGR8 921 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 WDR46O15213 610 aaKnown RBP14.48□□□□□ -0.09
COL18A1-201ENST00000342220 MED24O75448 989 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 GUCY2CP25092 1073 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 SMARCA1P28370 1054 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 GNG11P61952 73 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 MAP3K9P80192 1104 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 PDXDC2PQ6P474 469 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 GOLGA6L1Q8N7Z2 621 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 DESI2Q9BSY9 194 aa14.48□□□□□ -0.09
COL18A1-201ENST00000342220 TADA3O75528 432 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 USP2O75604 605 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-201ENST00000342220 NT5C2P49902 561 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 TXLNBQ8N3L3 684 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 DYDC2Q96IM9 177 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 MMTAG2Q9BU76 263 aaKnown RBP14.47□□□□□ -0.09
COL18A1-201ENST00000342220 hCG_1984214I3L0E3 225 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 EML1O00423 815 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 PSMA7O14818 248 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 BACH1O14867 736 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 TEX33O43247 280 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 IREB2P48200 963 aaKnown RBP14.47□□□□□ -0.09
COL18A1-201ENST00000342220 USP14P54578 494 aa14.47□□□□□ -0.09
COL18A1-201ENST00000342220 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms