RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
ATXN3-201ENST00000340660 RTP3Q9BQQ7 232 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 C1QTNF2Q9BXJ5 285 aa13.72□□□□□ -0.21
ATXN3-201ENST00000340660 ZNF214Q9UL59 606 aaPredicted RBP13.72□□□□□ -0.21
ATXN3-201ENST00000340660 MICAL3Q7RTP6 2002 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.21
ATXN3-201ENST00000340660 SLC30A4O14863 429 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 CTNNB1P35222 781 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 GRM5P41594 1212 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 MCAMP43121 646 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 WDR4P57081 412 aaKnown RBP13.71□□□□□ -0.21
ATXN3-201ENST00000340660 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.21
ATXN3-201ENST00000340660 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 LCE2CQ5TA81 110 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 UNQ6494/PRO21346Q6UXR6 183 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 DDX11Q96FC9 970 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
ATXN3-201ENST00000340660 SAP30BPQ9UHR5 308 aaKnown RBP13.71□□□□□ -0.21
ATXN3-201ENST00000340660 DMXL2Q8TDJ6 3036 aa13.71□□□□□ -0.22
ATXN3-201ENST00000340660 TENM4Q6N022 2769 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 NR3C2P08235 984 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 SELPP16109 830 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 PURAQ00577 322 aaKnown RBP13.7□□□□□ -0.22
ATXN3-201ENST00000340660 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
ATXN3-201ENST00000340660 N4BP2L1Q5TBK1 243 aaPredicted RBP13.7□□□□□ -0.22
ATXN3-201ENST00000340660 LRRC8DQ7L1W4 858 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 REPS2Q8NFH8 660 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 CTAGE1Q96RT6 745 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
ATXN3-201ENST00000340660 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 TRIP12Q14669 1992 aaPredicted RBP13.7□□□□□ -0.22
ATXN3-201ENST00000340660 MYO10Q9HD67 2058 aa13.7□□□□□ -0.22
ATXN3-201ENST00000340660 PDS5AQ29RF7 1337 aaKnown RBP13.69□□□□□ -0.22
ATXN3-201ENST00000340660 TERTO14746 1132 aaKnown RBP13.69□□□□□ -0.22
ATXN3-201ENST00000340660 MMP1P03956 469 aa13.69□□□□□ -0.22
ATXN3-201ENST00000340660 AMHP03971 560 aa13.69□□□□□ -0.22
ATXN3-201ENST00000340660 ASGR2P07307 311 aa13.69□□□□□ -0.22
ATXN3-201ENST00000340660 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
ATXN3-201ENST00000340660 SEPT2Q15019 361 aa13.69□□□□□ -0.22
ATXN3-201ENST00000340660 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
ATXN3-201ENST00000340660 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
ATXN3-201ENST00000340660 HNRNPABQ99729 332 aaKnown RBP13.69□□□□□ -0.22
ATXN3-201ENST00000340660 C11orf84Q9BUA3 381 aaPredicted RBP13.69□□□□□ -0.22
ATXN3-201ENST00000340660 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
ATXN3-201ENST00000340660 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
ATXN3-201ENST00000340660 CNOT1A5YKK6 2376 aaKnown RBP13.69□□□□□ -0.22
ATXN3-201ENST00000340660 RB1P06400 928 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 LDHCP07864 332 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 ADORA1P30542 326 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 COPB2P35606 906 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 NRIP1P48552 1158 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 GNAI1P63096 354 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 NR5A1Q13285 461 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 ATP2B3Q16720 1220 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 CERKLQ49MI3 558 aaPredicted RBP13.68□□□□□ -0.22
ATXN3-201ENST00000340660 CCDC102BQ68D86 513 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 NFRKBQ6P4R8 1299 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 SPICE1Q8N0Z3 855 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 LRRN4Q8WUT4 740 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 DHX38Q92620 1227 aaKnown RBP13.68□□□□□ -0.22
ATXN3-201ENST00000340660 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 RIPK3Q9Y572 518 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 LAMA5O15230 3695 aa13.68□□□□□ -0.22
ATXN3-201ENST00000340660 SCN10AQ9Y5Y9 1956 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 C2CD4DB7Z1M9 353 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 VWA5AO00534 786 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 KINO60870 393 aaKnown RBP13.67□□□□□ -0.22
ATXN3-201ENST00000340660 HLA-DOAP06340 250 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 BMPR1AP36894 532 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 GSTO1P78417 241 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 VN1R2Q8NFZ6 395 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 PDGFCQ9NRA1 345 aa13.67□□□□□ -0.22
ATXN3-201ENST00000340660 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
ATXN3-201ENST00000340660 DDX49Q9Y6V7 483 aaKnown RBP13.67□□□□□ -0.22
ATXN3-201ENST00000340660 MYL3P08590 195 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 DNAJB1P25685 340 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 MBTPS1Q14703 1052 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 MRPL14Q6P1L8 145 aaKnown RBP13.66□□□□□ -0.22
ATXN3-201ENST00000340660 ATG9AQ7Z3C6 839 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 RBM23Q86U06 439 aaKnown RBP13.66□□□□□ -0.22
ATXN3-201ENST00000340660 ADAM32Q8TC27 787 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 NETO1Q8TDF5 533 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 MTG1Q9BT17 334 aaPredicted RBP13.66□□□□□ -0.22
ATXN3-201ENST00000340660 S1PR5Q9H228 398 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 ERVK-5Q9HDB9 667 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 Q9Y3F1 56 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 HECTD1Q9ULT8 2610 aa13.66□□□□□ -0.22
ATXN3-201ENST00000340660 FOCADQ5VW36 1801 aa13.65□□□□□ -0.22
ATXN3-201ENST00000340660 EYA2O00167 538 aa13.65□□□□□ -0.22
ATXN3-201ENST00000340660 PARNO95453 639 aaKnown RBP13.65□□□□□ -0.22
ATXN3-201ENST00000340660 NBPF7P0C2Y1 421 aaPredicted RBP13.65□□□□□ -0.22
ATXN3-201ENST00000340660 RBL2Q08999 1139 aa13.65□□□□□ -0.22
ATXN3-201ENST00000340660 ATF7IPQ6VMQ6 1270 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms