RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 IFT20Q8IY31 132 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
CPSF7-201ENST00000340437 LZTS2Q9BRK4 669 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 MXD3Q9BW11 206 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 SEPT11Q9NVA2 429 aaKnown RBP15.86■□□□□ 0.13
CPSF7-201ENST00000340437 SPATA31A1Q5TZJ5 1347 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 CACNA1SQ13698 1873 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 BCL9LQ86UU0 1499 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 TAL1P17542 331 aaPredicted RBP15.86■□□□□ 0.13
CPSF7-201ENST00000340437 CORO7P57737 925 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 PRPF4BQ13523 1007 aaKnown RBP15.86■□□□□ 0.13
CPSF7-201ENST00000340437 FBXW10Q5XX13 1052 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 GUF1Q8N442 669 aaKnown RBP15.86■□□□□ 0.13
CPSF7-201ENST00000340437 BAP1Q92560 729 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 SPZ1Q9BXG8 430 aa15.86■□□□□ 0.13
CPSF7-201ENST00000340437 FKBP3Q00688 224 aaKnown RBP15.85■□□□□ 0.13
CPSF7-201ENST00000340437 CEP85LQ5SZL2 805 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 SLC30A10Q6XR72 485 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 PPM1EQ8WY54 764 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 PPANQ9NQ55 473 aaKnown RBP15.85■□□□□ 0.13
CPSF7-201ENST00000340437 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
CPSF7-201ENST00000340437 USP17L10C9JJH3 530 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 SEC24CP53992 1094 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 GPSM2P81274 684 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 CYP4A11Q02928 519 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 PURBQ96QR8 312 aaKnown RBP15.85■□□□□ 0.13
CPSF7-201ENST00000340437 MAGEF1Q9HAY2 307 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 PPP1R1BQ9UD71 204 aaPredicted RBP15.85■□□□□ 0.13
CPSF7-201ENST00000340437 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
CPSF7-201ENST00000340437 BCORQ6W2J9 1755 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 A0A1W2PQJ5 194 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 SFI1A8K8P3 1242 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 NEDD1Q8NHV4 660 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
CPSF7-201ENST00000340437 TLR2O60603 784 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 ERLIN2O94905 339 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 PDHBP11177 359 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 PABPC4Q13310 644 aaKnown RBP eCLIP15.84■□□□□ 0.13
CPSF7-201ENST00000340437 ASIC2Q16515 512 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.84■□□□□ 0.135e-7■■■■■ 44.9
CPSF7-201ENST00000340437 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
CPSF7-201ENST00000340437 CLIC2O15247 247 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 SLC9A1P19634 815 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 LRRC55Q6ZSA7 311 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 RTFDC1Q9BY42 306 aaPredicted RBP15.84■□□□□ 0.13
CPSF7-201ENST00000340437 CD209Q9NNX6 404 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 BCS1LQ9Y276 419 aa15.84■□□□□ 0.13
CPSF7-201ENST00000340437 DOCK2Q92608 1830 aa15.83■□□□□ 0.13
CPSF7-201ENST00000340437 GOLGA8KD6RF30 607 aa15.83■□□□□ 0.13
CPSF7-201ENST00000340437 CNBD1Q8NA66 436 aa15.83■□□□□ 0.13
CPSF7-201ENST00000340437 LUC7LQ9NQ29 371 aaKnown RBP15.83■□□□□ 0.13
CPSF7-201ENST00000340437 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 KIAA0754O94854 1291 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 TCP10Q12799 353 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 POTEGQ6S5H5 508 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 POTEEQ6S8J3 1075 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 ADGRF4Q8IZF3 695 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 BCAS3Q9H6U6 928 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 INPP5BP32019 993 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 PPP1R2P41236 205 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 CACNB3P54284 484 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 LRRC63Q05C16 580 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 USH1GQ495M9 461 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 TADA2BQ86TJ2 420 aa15.83■□□□□ 0.12
CPSF7-201ENST00000340437 PVALEFA0A1B0GWK0 134 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 PLA2G4BP0C869 781 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 NR2F2P24468 414 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 GJB7Q6PEY0 223 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 UBLCP1Q8WVY7 318 aaPredicted RBP15.82■□□□□ 0.12
CPSF7-201ENST00000340437 CASKIN2Q8WXE0 1202 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 RNPC3Q96LT9 517 aaKnown RBP15.82■□□□□ 0.12
CPSF7-201ENST00000340437 MTMR9Q96QG7 549 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 EMILIN3Q9NT22 766 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 RAD51CO43502 376 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 TM4SF1P30408 202 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 RPS6KA1Q15418 735 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 FIGNQ5HY92 759 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 MSL3Q8N5Y2 521 aaKnown RBP15.82■□□□□ 0.12
CPSF7-201ENST00000340437 ZNF622Q969S3 477 aaKnown RBP eCLIP15.82■□□□□ 0.127e-7■□□□□ 9.5
CPSF7-201ENST00000340437 DPH5Q9H2P9 285 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 CAPN7Q9Y6W3 813 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 EIF3HO15372 352 aaKnown RBP eCLIP15.82■□□□□ 0.124e-10■□□□□ 9.1
CPSF7-201ENST00000340437 SERPING1P05155 500 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 MNAT1P51948 309 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 KCNH2Q12809 1159 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 PAK2Q13177 524 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 PRR16Q569H4 304 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 HGSNATQ68CP4 663 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 C16orf86Q6ZW13 317 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 CCDC65Q8IXS2 484 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 ANKS1AQ92625 1134 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 DDX47Q9H0S4 455 aaKnown RBP15.82■□□□□ 0.12
CPSF7-201ENST00000340437 IKZF4Q9H2S9 585 aa15.82■□□□□ 0.12
CPSF7-201ENST00000340437 ANKRD36CQ5JPF3 1778 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms