RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 SNAP23O00161 211 aa13.72□□□□□ -0.21
XIRP1-201ENST00000340369 IRX4P78413 519 aa13.72□□□□□ -0.21
XIRP1-201ENST00000340369 SEPT2Q15019 361 aa13.72□□□□□ -0.21
XIRP1-201ENST00000340369 ME3Q16798 604 aa13.72□□□□□ -0.21
XIRP1-201ENST00000340369 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
XIRP1-201ENST00000340369 KMT5AQ9NQR1 393 aa13.72□□□□□ -0.21
XIRP1-201ENST00000340369 CLTCQ00610 1675 aaKnown RBP13.72□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L15C9J2P7 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L11C9JVI0 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L18D6R9N7 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L22D6RA61 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L19D6RCP7 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L20D6RJB6 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 USP17L24Q0WX57 530 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 MTMR2Q13614 643 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 DBN1Q16643 649 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 DCLK2Q8N568 766 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 ESYT2A0FGR8 921 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 PHLDB3Q6NSJ2 640 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 HOMER3Q9NSC5 361 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 RNF146Q9NTX7 359 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
XIRP1-201ENST00000340369 STMN1P16949 149 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 OR6J1Q8NGC5 347 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 LMBRD1Q9NUN5 540 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 FEM1BQ9UK73 627 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.21
XIRP1-201ENST00000340369 ATF2P15336 505 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 PDZD8Q8NEN9 1154 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 HDAC11Q96DB2 347 aa13.71□□□□□ -0.21
XIRP1-201ENST00000340369 MED23Q9ULK4 1368 aa13.71□□□□□ -0.22
XIRP1-201ENST00000340369 PRDX5P30044 214 aa13.71□□□□□ -0.22
XIRP1-201ENST00000340369 IL1RL1Q01638 556 aa13.71□□□□□ -0.22
XIRP1-201ENST00000340369 RASGRF1Q13972 1273 aa13.71□□□□□ -0.22
XIRP1-201ENST00000340369 RMDN3Q96TC7 470 aa13.71□□□□□ -0.22
XIRP1-201ENST00000340369 A0A0D9SFI3 127 aa13.71□□□□□ -0.22
XIRP1-201ENST00000340369 CASP2P42575 452 aa13.71□□□□□ -0.22
XIRP1-201ENST00000340369 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 MMEL1Q495T6 779 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 CCDC68Q9H2F9 335 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 ANTXR1Q9H6X2 564 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 MAD1L1Q9Y6D9 718 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 ATP8B3O60423 1300 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 BRD3Q15059 726 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 ADALQ6DHV7 355 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 COL23A1Q86Y22 540 aaPredicted RBP13.7□□□□□ -0.22
XIRP1-201ENST00000340369 TLR7Q9NYK1 1049 aaKnown RBP13.7□□□□□ -0.22
XIRP1-201ENST00000340369 ARMCX3Q9UH62 379 aaPredicted RBP13.7□□□□□ -0.22
XIRP1-201ENST00000340369 COG7P83436 770 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 UBE2SQ16763 222 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 PDZD4Q76G19 769 aaPredicted RBP13.7□□□□□ -0.22
XIRP1-201ENST00000340369 PPM1KQ8N3J5 372 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 BAG5Q9UL15 447 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 OR52Z1P0C646 297 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 ARHGAP4P98171 946 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 TFAMQ00059 246 aaKnown RBP13.7□□□□□ -0.22
XIRP1-201ENST00000340369 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 CFAP61Q8NHU2 1237 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 KIAA1468Q9P260 1216 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
XIRP1-201ENST00000340369 SERPINB6P35237 376 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 BFSP1Q12934 665 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
XIRP1-201ENST00000340369 HAUS8Q9BT25 410 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 SMYD2Q9NRG4 433 aa13.7□□□□□ -0.22
XIRP1-201ENST00000340369 CPSF1Q10570 1443 aaKnown RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 ZSCAN26Q16670 478 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 NOSTRINQ8IVI9 506 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 MYOZ2Q9NPC6 264 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 PPP2R2CQ9Y2T4 447 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 BZW2Q9Y6E2 419 aaKnown RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 RARBP10826 455 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 SPDL1Q96EA4 605 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 SPATA33Q96N06 139 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 COPRSQ9NQ92 184 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 CHMP6Q96FZ7 201 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 TSPYL2Q9H2G4 693 aaPredicted RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 STAT3P40763 770 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 GARSP41250 739 aaKnown RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 NAA35Q5VZE5 725 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 CACTINQ8WUQ7 758 aaKnown RBP13.69□□□□□ -0.22
XIRP1-201ENST00000340369 CAPS2Q9BXY5 557 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 KIAA1024Q9UPX6 916 aa13.69□□□□□ -0.22
XIRP1-201ENST00000340369 TECPR2O15040 1411 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms