RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PCDHAC2Q9Y5I4 1007 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PNMA6AP0CW24 399 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ATP2B2Q01814 1243 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TCP10Q12799 353 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ASTE1Q2TB18 679 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 SAMD3Q8N6K7 520 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ATRIPQ8WXE1 791 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 RUBCNQ92622 972 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TUFT1Q9NNX1 390 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TMOD2Q9NZR1 351 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CEP72Q9P209 647 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 MYO6Q9UM54 1294 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 KIAA1024Q9UPX6 916 aa11.88□□□□□ -0.51
TRAF3IP2-201ENST00000340026 IGLV3-22A0A075B6J6 115 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 MARCH6O60337 910 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 SPATA31C1P0DKV0 1188 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 STAT2P52630 851 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CBX1P83916 185 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 DMTNQ08495 405 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ARSHQ5FYA8 562 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 WDR93Q6P2C0 686 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CATSPER3Q86XQ3 398 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CSRNP1Q96S65 589 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 SH2D4AQ9H788 454 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 OLFML3Q9NRN5 406 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 KCND2Q9NZV8 630 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CNTNAP1P78357 1384 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 MED24O75448 989 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 GH2P01242 217 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ANXA13P27216 316 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CACNB3P54284 484 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PPP2R5CQ13362 524 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TMEM174Q8WUU8 243 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 HPS3Q969F9 1004 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 FBXL5Q9UKA1 691 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 UBE4BO95155 1302 aa11.87□□□□□ -0.51
TRAF3IP2-201ENST00000340026 A0A1W2PRG0 241 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 POTECB2RU33 542 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PDXKO00764 312 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 IDEP14735 1019 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 GPBP1Q86WP2 473 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CHURC1Q8WUH1 139 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PARD6BQ9BYG5 372 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 EHMT1Q9H9B1 1298 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PGAP2Q9UHJ9 254 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 DNM3Q9UQ16 869 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 DAAM1Q9Y4D1 1078 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CTAGE15A4D2H0 777 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 FAM86B1E9PN63 330 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 EYA4O95677 639 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 FAM86B2P0C5J1 330 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CTAGE8P0CG41 777 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 GAP43P17677 238 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 RXRBP28702 533 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 JAG1P78504 1218 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CKAP4Q07065 602 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 GIT2Q14161 759 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 RRP1BQ14684 758 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CCDC122Q5T0U0 273 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PDXDC1Q6P996 788 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CTAGE6Q86UF2 777 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CTAGE4Q8IX94 777 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 CCDC155Q8N6L0 562 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TRIM58Q8NG06 486 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 GBP3Q9H0R5 595 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ANKZF1Q9H8Y5 726 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 ARFGAP3Q9NP61 516 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 PLCB1Q9NQ66 1216 aa11.86□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TARSL2A2RTX5 802 aaKnown RBP11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 E9PMD0 336 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 MAP2K7O14733 419 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 EIF3DO15371 548 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 MSH4O15457 936 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 TBC1D8O95759 1140 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 MCM3P25205 808 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 KCNMA1Q12791 1236 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 KIF5AQ12840 1032 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 B3GNT9Q6UX72 402 aa11.85□□□□□ -0.51
TRAF3IP2-201ENST00000340026 RNF10Q8N5U6 811 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms