RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 NARFQ9UHQ1 456 aa12.15□□□□□ -0.46
SEMA4D-201ENST00000339861 UTP11Q9Y3A2 253 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-201ENST00000339861 ICA1Q05084 483 aa12.15□□□□□ -0.46
SEMA4D-201ENST00000339861 CTTNQ14247 550 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-201ENST00000339861 KCNB1Q14721 858 aa12.15□□□□□ -0.46
SEMA4D-201ENST00000339861 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.46
SEMA4D-201ENST00000339861 RAD54LQ92698 747 aa12.15□□□□□ -0.46
SEMA4D-201ENST00000339861 RCCD1A6NED2 376 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ZSCAN5CA6NGD5 496 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 MYL1P05976 194 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ADCY1Q08828 1119 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 SLC30A10Q6XR72 485 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 STXBP4Q6ZWJ1 553 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 GIMAP7Q8NHV1 300 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 TEKT1Q969V4 418 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 SH2D3AQ9BRG2 576 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 HPCAL4Q9UM19 191 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ATP8A1Q9Y2Q0 1164 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 COL5A2P05997 1499 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ATP2B4P23634 1241 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ALKBH5Q6P6C2 394 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 SH3RF1Q7Z6J0 888 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ADGRF4Q8IZF3 695 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ARFGAP2Q8N6H7 521 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 TBC1D22AQ8WUA7 517 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 EHD4Q9H223 541 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 PPP1R7Q15435 360 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 CCNI2Q6ZMN8 369 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 SRLQ86TD4 932 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 SFR1Q86XK3 245 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 CCDC50Q8IVM0 306 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 CCDC127Q96BQ5 260 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 GCNT4Q9P109 453 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 USP21Q9UK80 565 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 PDS5AQ29RF7 1337 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 CAMTA1Q9Y6Y1 1673 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ARHGEF35A5YM69 484 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 GOLGA8KD6RF30 607 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 EEF2P13639 858 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 SLCO1A2P46721 670 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 IFNAR2P48551 515 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 CARSP49589 748 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 GUCY1A3Q02108 690 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 DDX42Q86XP3 938 aaKnown RBP eCLIP12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 KCND1Q9NSA2 647 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
SEMA4D-201ENST00000339861 RPS6KA4O75676 772 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 HARSP12081 509 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 KRT5P13647 590 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 ELOA2Q8IYF1 753 aaPredicted RBP12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 OR2W6PQ8NHA6 318 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 FEZ2Q9UHY8 353 aaPredicted RBP12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 AMFRQ9UKV5 643 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 PDE2AO00408 941 aaPredicted RBP12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 PSMD14O00487 310 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 SERPING1P05155 500 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 LRRC63Q05C16 580 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 SEPT7Q16181 437 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 FBXO11Q86XK2 927 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 LRRC45Q96CN5 670 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 KDM3AQ9Y4C1 1321 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 TCP10L2B9ZVM9 353 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 GAS7O60861 476 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 B4GALNT4Q76KP1 1039 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 NEDD1Q8NHV4 660 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 ARHGAP20Q9P2F6 1191 aa12.13□□□□□ -0.47
SEMA4D-201ENST00000339861 AFDNP55196 1824 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 EPHB6O15197 1021 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 FUT2Q10981 343 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 DUSP9Q99956 384 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 ANO3Q9BYT9 981 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 NUCKS1Q9H1E3 243 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 TAOK3Q9H2K8 898 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 KBTBD4Q9NVX7 518 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 RABGAP1Q9Y3P9 1069 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 CLRN2A0PK11 232 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 ANO9A1A5B4 782 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 ANKRD62A6NC57 917 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 MYCLP12524 364 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 KLRC1P26715 233 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms