RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ATP2C1P98194 919 aaPredicted RBP13.81□□□□□ -0.2
DFFB-202ENST00000339350 AMPD2Q01433 879 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 FOXD4Q12950 439 aaPredicted RBP13.81□□□□□ -0.2
DFFB-202ENST00000339350 IRF2BP1Q8IU81 584 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 CCDC170Q8IYT3 715 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 ZNF34Q8IZ26 560 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 SMCR8Q8TEV9 937 aaPredicted RBP13.81□□□□□ -0.2
DFFB-202ENST00000339350 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 PCMTD1Q96MG8 357 aaPredicted RBP13.81□□□□□ -0.2
DFFB-202ENST00000339350 LIMA1Q9UHB6 759 aaKnown RBP13.81□□□□□ -0.2
DFFB-202ENST00000339350 GGA2Q9UJY4 613 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 RTL9Q8NET4 1388 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 DISP2A7MBM2 1401 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 BACH1O14867 736 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
DFFB-202ENST00000339350 TUBP50607 506 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 HERVK_113P62684 666 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 AMIGO3Q86WK7 504 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 TSEN2Q8NCE0 465 aaKnown RBP13.81□□□□□ -0.2
DFFB-202ENST00000339350 TNFRSF25Q93038 417 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 FAM184BQ9ULE4 1060 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 PAPPAQ13219 1627 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 FAM205AQ6ZU69 1335 aa13.81□□□□□ -0.2
DFFB-202ENST00000339350 CREB3O43889 395 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 SFSWAPQ12872 951 aaKnown RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 HVCN1Q96D96 273 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 LACRTQ9GZZ8 138 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 RWDD2AQ9UIY3 292 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 CNTNAP5Q8WYK1 1306 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 RASSF10A6NK89 507 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 CAMTA2O94983 1202 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 TMTC3Q6ZXV5 915 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 SDCCAG8Q86SQ7 713 aaPredicted RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 CAGE1Q8TC20 777 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 AENQ8WTP8 325 aaKnown RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 HPS3Q969F9 1004 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 TRIM47Q96LD4 638 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 TBC1D7Q9P0N9 293 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 WDR35Q9P2L0 1181 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 MYH10P35580 1976 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 LRRD1A4D1F6 860 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 MATR3P43243 847 aaKnown RBP eCLIP13.8□□□□□ -0.2
DFFB-202ENST00000339350 QPCTQ16769 361 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 NME8Q8N427 588 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 EHBP1Q8NDI1 1231 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 NACA2Q9H009 215 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 PANK4Q9NVE7 773 aa13.8□□□□□ -0.2
DFFB-202ENST00000339350 LUC7L2Q9Y383 392 aaKnown RBP13.8□□□□□ -0.2
DFFB-202ENST00000339350 COL4A1P02462 1669 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 NID2Q14112 1375 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 GTPBP6O43824 516 aaPredicted RBP13.79□□□□□ -0.2
DFFB-202ENST00000339350 KLRK1P26718 216 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 C2orf54Q08AI8 447 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 ZNF658Q5TYW1 1059 aaPredicted RBP13.79□□□□□ -0.2
DFFB-202ENST00000339350 WDR59Q6PJI9 974 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 KDM7AQ6ZMT4 941 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 RIOK1Q9BRS2 568 aaKnown RBP13.79□□□□□ -0.2
DFFB-202ENST00000339350 CPVLQ9H3G5 476 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 PREBQ9HCU5 417 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 FRMD4BQ9Y2L6 1034 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 TARSL2A2RTX5 802 aaKnown RBP13.79□□□□□ -0.2
DFFB-202ENST00000339350 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
DFFB-202ENST00000339350 GNAQP50148 359 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 Q4G0T1 1027 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
DFFB-202ENST00000339350 KRT26Q7Z3Y9 468 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 OGFOD1Q8N543 542 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 JADE2Q9NQC1 790 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 GALNT8Q9NY28 637 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 LEMD3Q9Y2U8 911 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 ITIH6Q6UXX5 1313 aa13.79□□□□□ -0.2
DFFB-202ENST00000339350 MYH14Q7Z406 1995 aaKnown RBP13.78□□□□□ -0.2
DFFB-202ENST00000339350 STXBP3O00186 592 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 EVI5O60447 810 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 HSF2BPO75031 334 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
DFFB-202ENST00000339350 SCG2P13521 617 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 NR1D1P20393 614 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 MDH1P40925 334 aaKnown RBP13.78□□□□□ -0.2
DFFB-202ENST00000339350 CDC37Q16543 378 aaPredicted RBP13.78□□□□□ -0.2
DFFB-202ENST00000339350 STAG2Q8N3U4 1231 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 MB21D1Q8N884 522 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 TMEM60Q9H2L4 133 aa13.78□□□□□ -0.2
DFFB-202ENST00000339350 PDE2AO00408 941 aaPredicted RBP13.78□□□□□ -0.2
DFFB-202ENST00000339350 DNAJC8O75937 253 aaPredicted RBP13.78□□□□□ -0.2
DFFB-202ENST00000339350 TRIM21P19474 475 aaKnown RBP13.78□□□□□ -0.2
DFFB-202ENST00000339350 INHBCP55103 352 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms