RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 GOLGA8OA6NCC3 632 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 HMGB1P1B2RPK0 211 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-201ENST00000338508 GOLGA8NF8WBI6 632 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 FLOT2Q14254 428 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 IMPG1Q17R60 797 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 TEX2Q8IWB9 1127 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 TEKT4Q8WW24 435 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 FANCLQ9NW38 375 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 BTN2A2Q8WVV5 523 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 USP19O94966 1318 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 PRPSAP2O60256 369 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 ARMC9Q7Z3E5 817 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 CLIC4Q9Y696 253 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
SHANK2-201ENST00000338508 NR2F2P24468 414 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 SNCBQ16143 134 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 DNAJC24Q6P3W2 148 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 NOSTRINQ8IVI9 506 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 ZC4H2Q9NQZ6 224 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
SHANK2-201ENST00000338508 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-201ENST00000338508 E2F6O75461 281 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 SUN1O94901 812 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 ELMOD1Q8N336 334 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 NACC1Q96RE7 527 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 TNKSO95271 1327 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 EFCAB8A8MWE9 144 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 DPYSL4O14531 572 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 SCG2P13521 617 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 DRC3Q9H069 523 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 UHRF1BP1LA0JNW5 1464 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 CREB3O43889 395 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 KCNA6P17658 529 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 ZNF394Q53GI3 561 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 LRRD1A4D1F6 860 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-201ENST00000338508 MYO1EQ12965 1108 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 KLC3Q6P597 504 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 TRAIPQ9BWF2 469 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 PPP2R2CQ9Y2T4 447 aa12.71□□□□□ -0.37
SHANK2-201ENST00000338508 MAP3K7O43318 606 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 ATP6V0A1Q93050 837 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 EPB41L5Q9HCM4 733 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 CDV3Q9UKY7 258 aaKnown RBP12.71□□□□□ -0.38
SHANK2-201ENST00000338508 ATP8B3O60423 1300 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 ZNF233A6NK53 670 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 PRPF4O43172 522 aaKnown RBP eCLIP12.71□□□□□ -0.382e-13■■□□□ 12.7
SHANK2-201ENST00000338508 MT-ND3P03897 115 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 ABCA10Q8WWZ4 1543 aa12.71□□□□□ -0.38
SHANK2-201ENST00000338508 DACH2Q96NX9 599 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 ATG3Q9NT62 314 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 BTBD18B2RXH4 712 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 NDUFA8P51970 172 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 AOC3Q16853 763 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 SMYD3Q9H7B4 428 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 LBRQ14739 615 aaKnown RBP12.7□□□□□ -0.38
SHANK2-201ENST00000338508 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 IFT43Q96FT9 208 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 EDEM3Q9BZQ6 932 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 KIF17Q9P2E2 1029 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 SNX2O60749 519 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 PSMC2P35998 433 aaKnown RBP12.7□□□□□ -0.38
SHANK2-201ENST00000338508 RNF135Q8IUD6 432 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-201ENST00000338508 RPF1Q9H9Y2 349 aaKnown RBP12.7□□□□□ -0.38
SHANK2-201ENST00000338508 PDE11AQ9HCR9 933 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 ASXL2Q76L83 1435 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 SYCE1LA8MT33 242 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 CHEK2O96017 543 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 HDLBPQ00341 1268 aaKnown RBP12.7□□□□□ -0.38
SHANK2-201ENST00000338508 UBE3AQ05086 875 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 CHRNDQ07001 517 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 HIF1AQ16665 826 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 CCDC157Q569K6 752 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 BBOF1Q8ND07 529 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 SH3KBP1Q96B97 665 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 CFAP69A5D8W1 941 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 COA7Q96BR5 231 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 EFHD1Q9BUP0 239 aa12.7□□□□□ -0.38
SHANK2-201ENST00000338508 MED7O43513 233 aa12.69□□□□□ -0.38
SHANK2-201ENST00000338508 FTCDO95954 541 aa12.69□□□□□ -0.38
SHANK2-201ENST00000338508 SLC7A5Q01650 507 aa12.69□□□□□ -0.38
SHANK2-201ENST00000338508 PPP6R3Q5H9R7 873 aaPredicted RBP12.69□□□□□ -0.38
SHANK2-201ENST00000338508 GOLGA8MH3BSY2 632 aa12.69□□□□□ -0.38
SHANK2-201ENST00000338508 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
SHANK2-201ENST00000338508 SGSM2O43147 1006 aa12.69□□□□□ -0.38
SHANK2-201ENST00000338508 POLE2P56282 527 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms