RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 CRYGNQ8WXF5 182 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 SENP7Q9BQF6 1050 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
PRKN-201ENST00000338468 MLXIPQ9HAP2 919 aa17.47■□□□□ 0.39
PRKN-201ENST00000338468 PFKFB2O60825 505 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 EIF5BO60841 1220 aaKnown RBP17.46■□□□□ 0.39
PRKN-201ENST00000338468 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
PRKN-201ENST00000338468 CYP2C18P33260 490 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 SREBF1P36956 1147 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 AP3B2Q13367 1082 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 NEDD9Q14511 834 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 FAM47CQ5HY64 1035 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 JAKMIP3Q5VZ66 844 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 MFSD5Q6N075 450 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 NLRX1Q86UT6 975 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 SESTD1Q86VW0 696 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 GPR20Q99678 358 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 PPP1R12CQ9BZL4 782 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 GLT8D2Q9H1C3 349 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 JADE2Q9NQC1 790 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 VPS54Q9P1Q0 977 aa17.46■□□□□ 0.39
PRKN-201ENST00000338468 MUC3AQ02505 3323 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 DTNBO60941 627 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 CYP2C9P11712 490 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 PSEN2P49810 448 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
PRKN-201ENST00000338468 FPGSQ05932 587 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 PTPN11Q06124 597 aaPredicted RBP17.45■□□□□ 0.38
PRKN-201ENST00000338468 C16orf59Q7L2K0 433 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 MXRA8Q9BRK3 442 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 WNT8AQ9H1J5 351 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 HIPK3Q9H422 1215 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 EHMT1Q9H9B1 1298 aa17.45■□□□□ 0.38
PRKN-201ENST00000338468 LARGE1O95461 756 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 CSF2RAP15509 400 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 CHMP4BP1P59074 171 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 SSRP1Q08945 709 aaKnown RBP17.44■□□□□ 0.38
PRKN-201ENST00000338468 MTMR1Q13613 665 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 HIC1Q14526 733 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 MFSD10Q14728 455 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 KIAA0753Q2KHM9 967 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 TJAP1Q5JTD0 557 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 GDF6Q6KF10 455 aaPredicted RBP17.44■□□□□ 0.38
PRKN-201ENST00000338468 RASGRP4Q8TDF6 673 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
PRKN-201ENST00000338468 VWCEQ96DN2 955 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 AIFM3Q96NN9 605 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 KIF2CQ99661 725 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 SLKQ9H2G2 1235 aaPredicted RBP17.44■□□□□ 0.38
PRKN-201ENST00000338468 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 HDAC6Q9UBN7 1215 aa17.44■□□□□ 0.38
PRKN-201ENST00000338468 CPLX1O14810 134 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 EDIL3O43854 480 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 DEXIO95424 95 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 LGALS2P05162 132 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 SUPT20HL2P0C7V6 817 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 ARP10275 920 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 DNAJB2P25686 324 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 NEK4P51957 841 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 ARHGAP4P98171 946 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 ANKRD1Q15327 319 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 NPY5RQ15761 445 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 ME3Q16798 604 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 REXO1Q8N1G1 1221 aaKnown RBP17.43■□□□□ 0.38
PRKN-201ENST00000338468 CDHR1Q96JP9 859 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 ALG1Q9BT22 464 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 SH3GLB2Q9NR46 395 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 KCNH7Q9NS40 1196 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 PKD2L1Q9P0L9 805 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 GTF2IRD1Q9UHL9 959 aa17.43■□□□□ 0.38
PRKN-201ENST00000338468 FAM86B1E9PN63 330 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 MEIS1O00470 390 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 MAFGO15525 162 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 CYP3A4P08684 503 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 FAM86B2P0C5J1 330 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 GNA11P29992 359 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 CEP55Q53EZ4 464 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 TRIM50Q86XT4 487 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 GIMAP8Q8ND71 665 aaPredicted RBP17.42■□□□□ 0.38
PRKN-201ENST00000338468 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 KATNAL1Q9BW62 490 aa17.42■□□□□ 0.38
PRKN-201ENST00000338468 IGLV3-22A0A075B6J6 115 aa17.41■□□□□ 0.38
PRKN-201ENST00000338468 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 GSTTP1A0A1W2PQM5 241 aa17.41■□□□□ 0.38
PRKN-201ENST00000338468 NOP56O00567 594 aaKnown RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 CCL23P55773 120 aa17.41■□□□□ 0.38
PRKN-201ENST00000338468 ZNF200P98182 395 aaPredicted RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 SP4Q02446 784 aa17.41■□□□□ 0.38
PRKN-201ENST00000338468 ITGB3BPQ13352 177 aaPredicted RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 PPIGQ13427 754 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRKN-201ENST00000338468 GRIN2CQ14957 1233 aa17.41■□□□□ 0.38
PRKN-201ENST00000338468 PTGISQ16647 500 aa17.41■□□□□ 0.38
PRKN-201ENST00000338468 CPLX2Q6PUV4 134 aaKnown RBP17.41■□□□□ 0.38
PRKN-201ENST00000338468 TMEM199Q8N511 208 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms