RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 DEFB123Q8N688 67 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 ZNF713Q8N859 430 aaPredicted RBP23.98■■□□□ 1.43
RAB28-203ENST00000338176 GPR20Q99678 358 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 NOP56O00567 594 aaKnown RBP23.98■■□□□ 1.43
RAB28-203ENST00000338176 LGALS2P05162 132 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 KCNA2P16389 499 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 IFNAR1P17181 557 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 SESTD1Q86VW0 696 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 C7orf31Q8N865 590 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 DHX38Q92620 1227 aaKnown RBP23.98■■□□□ 1.43
RAB28-203ENST00000338176 GPRASP2Q96D09 838 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 GTF2IRD1Q9UHL9 959 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 NOD1Q9Y239 953 aa23.98■■□□□ 1.43
RAB28-203ENST00000338176 COL6A3P12111 3177 aa23.97■■□□□ 1.43
RAB28-203ENST00000338176 FAM161BQ96MY7 647 aa23.97■■□□□ 1.43
RAB28-203ENST00000338176 JADE2Q9NQC1 790 aa23.97■■□□□ 1.43
RAB28-203ENST00000338176 MTMR1Q13613 665 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 UTP14CQ5TAP6 766 aaKnown RBP23.96■■□□□ 1.43
RAB28-203ENST00000338176 RASGRP4Q8TDF6 673 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 SENP7Q9BQF6 1050 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 KATNAL1Q9BW62 490 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 CXXC1Q9P0U4 656 aaPredicted RBP23.96■■□□□ 1.43
RAB28-203ENST00000338176 VPS54Q9P1Q0 977 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 GRXCR1A8MXD5 290 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 AKAP17AQ02040 695 aaKnown RBP23.96■■□□□ 1.43
RAB28-203ENST00000338176 OTOP2Q7RTS6 562 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 DEFB128Q7Z7B8 93 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 WNT8BQ93098 351 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 ZNF274Q96GC6 653 aaPredicted RBP23.96■■□□□ 1.43
RAB28-203ENST00000338176 MXRA8Q9BRK3 442 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 RNF26Q9BY78 433 aaPredicted RBP23.96■■□□□ 1.43
RAB28-203ENST00000338176 EHMT1Q9H9B1 1298 aa23.96■■□□□ 1.43
RAB28-203ENST00000338176 H3BRB1 525 aa23.95■■□□□ 1.42
RAB28-203ENST00000338176 ARP10275 920 aa23.95■■□□□ 1.42
RAB28-203ENST00000338176 GPR153Q6NV75 609 aa23.95■■□□□ 1.42
RAB28-203ENST00000338176 UIMC1Q96RL1 719 aa23.95■■□□□ 1.42
RAB28-203ENST00000338176 ZMYND12Q9H0C1 365 aa23.95■■□□□ 1.42
RAB28-203ENST00000338176 TUT1Q9H6E5 874 aaKnown RBP23.95■■□□□ 1.42
RAB28-203ENST00000338176 FOSP01100 380 aaPredicted RBP23.94■■□□□ 1.42
RAB28-203ENST00000338176 PSRC1Q6PGN9 363 aaPredicted RBP23.94■■□□□ 1.42
RAB28-203ENST00000338176 TET1Q8NFU7 2136 aa23.94■■□□□ 1.42
RAB28-203ENST00000338176 FGBP02675 491 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 SREBF1P36956 1147 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 RASIP1Q5U651 963 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 AIFM3Q96NN9 605 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 TANC1Q9C0D5 1861 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 KCNH7Q9NS40 1196 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 TPCN1Q9ULQ1 816 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 ESYT2A0FGR8 921 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 IQCF3P0C7M6 154 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 AP3B2Q13367 1082 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 MTMR10Q9NXD2 777 aa23.93■■□□□ 1.42
RAB28-203ENST00000338176 CDH23Q9H251 3354 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 GSTTP1A0A1W2PQM5 241 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 SMIM10L2AP0DMW4 78 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 SMIM10L2BP0DMW5 78 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 SMAD3P84022 425 aaKnown RBP23.92■■□□□ 1.42
RAB28-203ENST00000338176 ARHGAP4P98171 946 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 RETREG2Q8NC44 543 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 HERVK_113Q902F9 699 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 CDHR1Q96JP9 859 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 C6orf50Q9HD87 102 aa23.92■■□□□ 1.42
RAB28-203ENST00000338176 PITPNM1O00562 1244 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 TCF7P36402 384 aaPredicted RBP23.91■■□□□ 1.42
RAB28-203ENST00000338176 AK2P54819 239 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 ANAPC15P60006 121 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 SSRP1Q08945 709 aaKnown RBP23.91■■□□□ 1.42
RAB28-203ENST00000338176 SCRN1Q12765 414 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 BFSP2Q13515 415 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 CEP55Q53EZ4 464 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 GLT8D2Q9H1C3 349 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 FAM86B1E9PN63 330 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 CPLX1O14810 134 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 FAM86B2P0C5J1 330 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 PBX2P40425 430 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 ITGB3BPQ13352 177 aaPredicted RBP23.91■■□□□ 1.42
RAB28-203ENST00000338176 GPNMBQ14956 572 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 REXO1Q8N1G1 1221 aaKnown RBP23.91■■□□□ 1.42
RAB28-203ENST00000338176 GIMAP8Q8ND71 665 aaPredicted RBP23.91■■□□□ 1.42
RAB28-203ENST00000338176 CCDC12Q8WUD4 166 aaPredicted RBP23.91■■□□□ 1.42
RAB28-203ENST00000338176 RNPEPQ9H4A4 650 aa23.91■■□□□ 1.42
RAB28-203ENST00000338176 ZNF76P36508 570 aa23.9■■□□□ 1.42
RAB28-203ENST00000338176 TRIM71Q2Q1W2 868 aaKnown RBP23.9■■□□□ 1.42
RAB28-203ENST00000338176 RPUSD2Q8IZ73 545 aaKnown RBP23.9■■□□□ 1.42
RAB28-203ENST00000338176 CRYGNQ8WXF5 182 aa23.9■■□□□ 1.42
RAB28-203ENST00000338176 TTYH1Q9H313 450 aaPredicted RBP23.9■■□□□ 1.42
RAB28-203ENST00000338176 AGO4Q9HCK5 861 aaKnown RBP23.9■■□□□ 1.42
RAB28-203ENST00000338176 SETD4Q9NVD3 440 aa23.9■■□□□ 1.42
RAB28-203ENST00000338176 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.89■■□□□ 1.42
RAB28-203ENST00000338176 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.89■■□□□ 1.42
RAB28-203ENST00000338176 MEIS1O00470 390 aa23.89■■□□□ 1.42
RAB28-203ENST00000338176 CKBP12277 381 aa23.89■■□□□ 1.42
RAB28-203ENST00000338176 TEX2Q8IWB9 1127 aa23.89■■□□□ 1.42
RAB28-203ENST00000338176 C17orf102A2RUQ5 167 aa23.88■■□□□ 1.41
RAB28-203ENST00000338176 TREHO43280 583 aa23.88■■□□□ 1.41
RAB28-203ENST00000338176 LARGE1O95461 756 aa23.88■■□□□ 1.41
RAB28-203ENST00000338176 MARK3P27448 753 aa23.88■■□□□ 1.41
RAB28-203ENST00000338176 PTK7Q13308 1070 aa23.88■■□□□ 1.41
RAB28-203ENST00000338176 TRIM22Q8IYM9 498 aa23.88■■□□□ 1.41
RAB28-203ENST00000338176 CAGE1Q8TC20 777 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms