RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 SH3GLB2Q9NR46 395 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 NFKBIAP25963 317 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SLC39A14Q15043 492 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 CNGA3Q16281 694 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 HERC4Q5GLZ8 1057 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 BEND6Q5SZJ8 279 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ZNF710Q8N1W2 664 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 NUDCD1Q96RS6 583 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 FOXP3Q9BZS1 431 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 WWP1Q9H0M0 922 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ABCA8O94911 1581 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 MYL7Q01449 175 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 KMT5BQ4FZB7 885 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 KAZNQ674X7 775 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 EPM2AIP1Q7L775 607 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 GPBP1Q86WP2 473 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 BRD8Q9H0E9 1235 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SLC38A10Q9HBR0 1119 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ATP8A1Q9Y2Q0 1164 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 RPAP1Q9BWH6 1393 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SRGAP2CP0DJJ0 459 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 TFCP2Q12800 502 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 CLEC17AQ6ZS10 378 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 CADPS2Q86UW7 1296 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 DYDC2Q96IM9 177 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 TRIM8Q9BZR9 551 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 TAF1DQ9H5J8 278 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ZSWIM6Q9HCJ5 1215 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SGK1O00141 431 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SEC31AO94979 1220 aaKnown RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 RCAN1P53805 252 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 RBL2Q08999 1139 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 AGBL2Q5U5Z8 902 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 MPRIPQ6WCQ1 1025 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 PPP1R2P1Q96PQ5 205 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 LSG1Q9H089 658 aaKnown RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 CEP72Q9P209 647 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 UBN2Q6ZU65 1347 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 PRR23D1E9PI22 279 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ZBTB7BO15156 539 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 AFPP02771 609 aaKnown RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 PRR23D2P0DMB1 279 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 FRA10AC1Q70Z53 315 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SCG3Q8WXD2 468 aaKnown RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SOX6P35712 828 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 RIPPLY1Q0D2K3 151 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 TRIM69Q86WT6 500 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 NCAPG2Q86XI2 1143 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 RSPH1Q8WYR4 309 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 PFASO15067 1338 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 TYW5A2RUC4 315 aaKnown RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 BUB1O43683 1085 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ATICP31939 592 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ARL4CP56559 192 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 NUP107P57740 925 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ILF2Q12905 390 aaKnown RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 TSHZ3Q63HK5 1081 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 NUGGCQ68CJ6 796 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 SGSM3Q96HU1 749 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 DESI2Q9BSY9 194 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 EHD2Q9NZN4 543 aa5.94□□□□□ -1.46
PTPRB-202ENST00000334414 ZMYND8Q9ULU4 1186 aaPredicted RBP5.94□□□□□ -1.46
PTPRB-202ENST00000334414 PBRM1Q86U86 1689 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 EIF3HO15372 352 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ATP5BP06576 529 aaKnown RBP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 PSMC2P35998 433 aaKnown RBP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 GRM1Q13255 1194 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ARL6IP4Q66PJ3 421 aaKnown RBP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 RNF169Q8NCN4 708 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 APBB2Q92870 758 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 TUBGCP2Q9BSJ2 902 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 KDM4CQ9H3R0 1056 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 TJP3O95049 919 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 LAMB3Q13751 1172 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 PATL1Q86TB9 770 aaKnown RBP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 SNF8Q96H20 258 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 TMEM206Q9H813 350 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ABCB6Q9NP58 842 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ZNF229Q9UJW7 825 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 CDV3Q9UKY7 258 aaKnown RBP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 WDR7Q9Y4E6 1490 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 DYTNA2CJ06 578 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 HSPA4LO95757 839 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 DPH6Q7L8W6 267 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 SETD3Q86TU7 594 aaPredicted RBP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 OSCARQ8IYS5 282 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 RASA4BC9J798 803 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 MYO1FO00160 1098 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 RASA4O43374 803 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ATP5JP18859 108 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ATP2B4P23634 1241 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 GGCXP38435 758 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 RAPH1Q70E73 1250 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 VPS39Q96JC1 886 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ZSCAN10Q96SZ4 725 aaPredicted RBP5.93□□□□□ -1.46
PTPRB-202ENST00000334414 DPH5Q9H2P9 285 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 WDR19Q8NEZ3 1342 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 ARHGEF37A1IGU5 675 aa5.93□□□□□ -1.46
PTPRB-202ENST00000334414 MFAP3LO75121 409 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms