RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 DDX20Q9UHI6 824 aaKnown RBP15.08■□□□□ 0
SYNE3-201ENST00000334258 PCDHA6Q9UN73 950 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 PCDHA8Q9Y5H6 950 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 CEP104O60308 925 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 CYP2D6P10635 497 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 RAPGEF1Q13905 1077 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 LRRC41Q15345 812 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 NAIF1Q69YI7 327 aaPredicted RBP15.08■□□□□ 0
SYNE3-201ENST00000334258 PDXDC1Q6P996 788 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 CYB5D1Q6P9G0 228 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 SV2BQ7L1I2 683 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 TAF1DQ9H5J8 278 aaPredicted RBP15.08■□□□□ 0
SYNE3-201ENST00000334258 ACTR5Q9H9F9 607 aaPredicted RBP15.08■□□□□ 0
SYNE3-201ENST00000334258 NUP98P52948 1817 aa15.08■□□□□ 0
SYNE3-201ENST00000334258 FRMD3A2A2Y4 597 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 RASSF9O75901 435 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 OR52Z1P0C646 297 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 POLR2FP61218 127 aaKnown RBP15.07■□□□□ 0
SYNE3-201ENST00000334258 PREPLQ4J6C6 727 aaPredicted RBP15.07■□□□□ 0
SYNE3-201ENST00000334258 TRAPPC3LQ5T215 181 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 CD302Q8IX05 232 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 TMBIM4Q9HC24 238 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 ADAMTS1Q9UHI8 967 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 NOVA2Q9UNW9 492 aaKnown RBP15.07■□□□□ 0
SYNE3-201ENST00000334258 COL4A1P02462 1669 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 PAPPAQ13219 1627 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 MPHOSPH10O00566 681 aaKnown RBP15.07■□□□□ 0
SYNE3-201ENST00000334258 PJA2O43164 708 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 HSD17B3P37058 310 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 RUFY4Q6ZNE9 571 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 MREGQ8N565 214 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 LRRC45Q96CN5 670 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 C7orf25Q9BPX7 421 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 TMCO5BA8MYB1 307 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 LCA5LO95447 670 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 TXKP42681 527 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 PLCB4Q15147 1175 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 RPS6KA1Q15418 735 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 BAP1Q92560 729 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 AP1M1Q9BXS5 423 aa15.07■□□□□ 0
SYNE3-201ENST00000334258 NEBLO76041 1014 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 RPSAP08865 295 aaKnown RBP15.06■□□□□ 0
SYNE3-201ENST00000334258 PARP10Q53GL7 1025 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 MSL1Q68DK7 614 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 CENPPQ6IPU0 288 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 PNMA1Q8ND90 353 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 TSG101Q99816 390 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 MAGEF1Q9HAY2 307 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 CLNS1AP54105 237 aaKnown RBP15.06■□□□□ 0
SYNE3-201ENST00000334258 SARNPP82979 210 aaKnown RBP15.06■□□□□ 0
SYNE3-201ENST00000334258 TFAP4Q01664 338 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 IFFO1Q0D2I5 559 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 DRP2Q13474 957 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 QPCTQ16769 361 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 GKAP1Q5VSY0 366 aaPredicted RBP15.06■□□□□ 0
SYNE3-201ENST00000334258 FUKQ8N0W3 1084 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 SEC16BQ96JE7 1060 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 NLRP3Q96P20 1036 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 PAGR1Q9BTK6 254 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 GOLPH3Q9H4A6 298 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 KANSL2Q9H9L4 492 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 MCM8Q9UJA3 840 aa15.06■□□□□ 0
SYNE3-201ENST00000334258 SSU72P8A0A1W2PR75 194 aa15.05■□□□□ 0
SYNE3-201ENST00000334258 DNM1LO00429 736 aa15.05■□□□□ 0
SYNE3-201ENST00000334258 TRAF5O00463 557 aa15.05■□□□□ 0
SYNE3-201ENST00000334258 PCP11498 1178 aaKnown RBP15.05■□□□□ 0
SYNE3-201ENST00000334258 HSPA9P38646 679 aaKnown RBP15.05■□□□□ 0
SYNE3-201ENST00000334258 ERVK-9P63128 1117 aa15.05■□□□□ 0
SYNE3-201ENST00000334258 KRT71Q3SY84 523 aa15.05■□□□□ 0
SYNE3-201ENST00000334258 AK8Q96MA6 479 aa15.05■□□□□ 0
SYNE3-201ENST00000334258 LSM14BQ9BX40 385 aaKnown RBP15.05■□□□□ 0
SYNE3-201ENST00000334258 OSBPL7Q9BZF2 842 aa15.05■□□□□ 0
SYNE3-201ENST00000334258 ZNF219Q9P2Y4 722 aaPredicted RBP15.05■□□□□ 0
SYNE3-201ENST00000334258 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ 0
SYNE3-201ENST00000334258 PHF20L1A8MW92 1017 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 RPS6KA4O75676 772 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 GBP2P32456 591 aaPredicted RBP15.05■□□□□ -0
SYNE3-201ENST00000334258 EPS15P42566 896 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 KLHL30Q0D2K2 578 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 NFIXQ14938 502 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 FAM83BQ5T0W9 1011 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 USP38Q8NB14 1042 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 TACO1Q9BSH4 297 aaKnown RBP15.05■□□□□ -0
SYNE3-201ENST00000334258 ANKIB1Q9P2G1 1089 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 STX8Q9UNK0 236 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 MINPP1Q9UNW1 487 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 GRID2IPA4D2P6 1211 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 LAD1O00515 517 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 SERPING1P05155 500 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 NAPAP54920 295 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 NAB2Q15742 525 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 CAVIN4Q5BKX8 364 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 CCDC50Q8IVM0 306 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 TBC1D31Q96DN5 1066 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 PACSIN1Q9BY11 444 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 CRNKL1Q9BZJ0 848 aaKnown RBP15.05■□□□□ -0
SYNE3-201ENST00000334258 PLCB1Q9NQ66 1216 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 MCM9Q9NXL9 1143 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 BAIAP2L1Q9UHR4 511 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms